RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DPTQ07507 201 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 ZNF211Q13398 564 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-225ENST00000483506 CDKN3Q16667 212 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 FAM182AQ5T1J6 154 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 LRRC66Q68CR7 880 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 NLRP8Q86W28 1048 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 CDKL3Q8IVW4 592 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-225ENST00000483506 ZNF567Q8N184 647 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 SLC25A45Q8N413 288 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 PLA2G15Q8NCC3 412 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 LPCAT1Q8NF37 534 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 SMIM14Q96QK8 99 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 FCRL5Q96RD9 977 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 APOOQ9BUR5 198 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 DNAJC28Q9NX36 388 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 TOR4AQ9NXH8 423 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 PNMA8BQ9ULN7 279 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-225ENST00000483506 WASF3Q9UPY6 502 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 PPP2R2CQ9Y2T4 447 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 TDRD6O60522 2096 aaKnown RBP18.01■□□□□ 0.47
HDAC6-225ENST00000483506 H3BM21 787 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 H7C0C1 242 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 SDC3O75056 442 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 MT-CYBP00156 380 aaPredicted RBP18■□□□□ 0.47
HDAC6-225ENST00000483506 PCCBP05166 539 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 GIMD1P0DJR0 217 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 RBP3P10745 1247 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 NFKB1P19838 968 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 RBL1P28749 1068 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 ETV3P41162 512 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 ATP5OP48047 213 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 SHC2P98077 582 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 CDK18Q07002 472 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 MEI1Q5TIA1 1274 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 PNCKQ6P2M8 343 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 ZNF765Q7L2R6 523 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 TTC13Q8NBP0 860 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 SPATA22Q8NHS9 363 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 BTN2A2Q8WVV5 523 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 MLPHQ9BV36 600 aaPredicted RBP18■□□□□ 0.47
HDAC6-225ENST00000483506 UCKL1Q9NWZ5 548 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 KLHL8Q9P2G9 620 aaPredicted RBP18■□□□□ 0.47
HDAC6-225ENST00000483506 FTSJ1Q9UET6 329 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 OR1A2Q9Y585 309 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 CSNK1G3Q9Y6M4 447 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 CEP295Q9C0D2 2601 aa18■□□□□ 0.47
HDAC6-225ENST00000483506 SPEGQ15772 3267 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 GOLGA6L9A6NEM1 432 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 TRIM16O95361 564 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 EPOP01588 193 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 C1SP09871 688 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 FTH1P19P0C7X4 201 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 TSHRP16473 764 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 JUNDP17535 347 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 HTR1BP28222 390 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 EIF3EP60228 445 aaKnown RBP17.99■□□□□ 0.47
HDAC6-225ENST00000483506 ZNF542PQ5EBM4 170 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 KDELC1Q6UW63 502 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 Q6ZVL8 140 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 PELI3Q8N2H9 469 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 EID2Q8N6I1 236 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 ZNF548Q8NEK5 533 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-225ENST00000483506 OR4C6Q8NH72 309 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 ATL2Q8NHH9 583 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 FUBP1Q96AE4 644 aaKnown RBP17.99■□□□□ 0.47
HDAC6-225ENST00000483506 ALS2CR12Q96Q35 445 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 FERMT1Q9BQL6 677 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 LZTFL1Q9NQ48 299 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 FAM153AQ9UHL3 310 aa17.99■□□□□ 0.47
HDAC6-225ENST00000483506 A0A0U1RQS6 177 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 LOC285095A0A1B0GVY8 99 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 K7ESM1 405 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 SCAMP1O15126 338 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 NDST3O95803 873 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 GALNT3Q14435 633 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 PROX2Q3B8N5 592 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 PID1Q7Z2X4 250 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 PHACTR4Q8IZ21 702 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 NRSN1Q8IZ57 195 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 TRIM58Q8NG06 486 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 OXNAD1Q96HP4 312 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-225ENST00000483506 PDLIM2Q96JY6 352 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 WDR92Q96MX6 357 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 SRPK1Q96SB4 655 aaKnown RBP17.98■□□□□ 0.47
HDAC6-225ENST00000483506 TEX101Q9BY14 249 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 GBA3Q9H227 469 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 CARD9Q9H257 536 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 WDR26Q9H7D7 661 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 CAAP1Q9H8G2 361 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 USP29Q9HBJ7 922 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 MAGEE1Q9HCI5 957 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 NLGN3Q9NZ94 848 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 APOBEC3BQ9UH17 382 aaKnown RBP17.98■□□□□ 0.47
HDAC6-225ENST00000483506 APOBEC2Q9Y235 224 aaKnown RBP17.98■□□□□ 0.47
HDAC6-225ENST00000483506 DGKBQ9Y6T7 804 aa17.98■□□□□ 0.47
HDAC6-225ENST00000483506 RGSL1A5PLK6 1076 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 NEMP2A6NFY4 417 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 CACNB4O00305 520 aaPredicted RBP17.97■□□□□ 0.47
HDAC6-225ENST00000483506 TRIM38O00635 465 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 TNFRSF10CO14798 259 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms