RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 GLRA4Q5JXX5 417 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 ANKRD22Q5VYY1 191 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 TRNP1Q6NT89 227 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 KCNT2Q6UVM3 1135 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 CCDC91Q7Z6B0 441 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SERINC5Q86VE9 423 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 FAM228AQ86W67 206 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 FUKQ8N0W3 1084 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 FIBCD1Q8N539 461 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 BANPQ8N9N5 519 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 PCSK9Q8NBP7 692 aaKnown RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 GSDMBQ8TAX9 411 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 MGARPQ8TDB4 240 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 ACMSDQ8TDX5 336 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 DCAKDQ8WVC6 231 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 HTR3CQ8WXA8 447 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SMARCD1Q96GM5 515 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 APOPT1Q96IL0 206 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SENP8Q96LD8 212 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 PWWP2AQ96N64 755 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SPATA13Q96N96 652 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 OLFM3Q96PB7 478 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 NPY6RQ99463 290 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 EBNA1BP2Q99848 306 aaKnown RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 ACBD6Q9BR61 282 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 MED10Q9BTT4 135 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 APOL6Q9BWW8 343 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 MRPL9Q9BYD2 267 aaKnown RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 FGFR1OP2Q9NVK5 253 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 DONSONQ9NYP3 566 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 H2AFY2Q9P0M6 372 aaPredicted RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 CTNNAL1Q9UBT7 734 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 CGGBP1Q9UFW8 167 aaPredicted RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 HES2Q9Y543 173 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 PCDHGB2Q9Y5G2 931 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SDR42E2A6NKP2 422 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 GOLGA8MH3BSY2 632 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 FFAR2O15552 330 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 SEPT4O43236 478 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 TGM5O43548 720 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 CA12O43570 354 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 LPXNO60711 386 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 EDF1O60869 148 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 RASSF9O75901 435 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 PRAMEF1O95521 474 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 CKMP06732 381 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 APRTP07741 180 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 C5AR1P21730 350 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 GLDCP23378 1020 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 LMO2P25791 158 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 CST5P28325 142 aaPredicted RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 SSTR1P30872 391 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 SLC8A1P32418 973 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 ECI1P42126 302 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 AGFG1P52594 562 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 PHC1P78364 1004 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 DEUP1Q05D60 604 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 ADIGQ0VDE8 80 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 ILF2Q12905 390 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 MTA1Q13330 715 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 RIPK1Q13546 671 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 FASTKD3Q14CZ7 662 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 PRKD1Q15139 912 aaPredicted RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 PGS1Q32NB8 556 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 GALNTL6Q49A17 601 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 DCAF6Q58WW2 860 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 RAB41Q5JT25 222 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 PRAMEF19Q5SWL8 479 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 UBAP2Q5T6F2 1119 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 CST9Q5W186 159 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 ATG16L1Q676U5 607 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 LRRC8BQ6P9F7 803 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 TIFABQ6ZNK6 161 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 CLEC20AQ6ZU45 233 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 UBE2Q1Q7Z7E8 422 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 PRUNE1Q86TP1 453 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 LRRC49Q8IUZ0 686 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 DEFB106AQ8N104 65 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 THEM5Q8N1Q8 247 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 GDAP1Q8TB36 358 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 RNF139Q8WU17 664 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 ATP2A3Q93084 1043 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 FAM149B1Q96BN6 582 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 TBC1D31Q96DN5 1066 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 HHIPL1Q96JK4 782 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 ZC3H10Q96K80 434 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 RAB3IPQ96QF0 476 aaPredicted RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 TRPM7Q96QT4 1865 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 DIRC2Q96SL1 478 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 SYT15Q9BQS2 421 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 SIKE1Q9BRV8 207 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 TACO1Q9BSH4 297 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 KRTAP17-1Q9BYP8 105 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 SENP6Q9GZR1 1112 aaPredicted RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 DPEP3Q9H4B8 488 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 FAM96AQ9H5X1 160 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 ELAC1Q9H777 363 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 CSNK1G1Q9HCP0 422 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 SEMA3GQ9NS98 782 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 KLC4Q9NSK0 619 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms