RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CMTR2Q8IYT2 770 aaKnown RBP12.72□□□□□ -0.37
VPS52-218ENST00000482399 GPR152Q8TDT2 470 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 ZNF597Q96LX8 424 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 GPATCH1Q9BRR8 931 aaKnown RBP12.72□□□□□ -0.37
VPS52-218ENST00000482399 RBM38Q9H0Z9 239 aaKnown RBP12.72□□□□□ -0.37
VPS52-218ENST00000482399 NDFIP2Q9NV92 336 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 ST14Q9Y5Y6 855 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 USP3Q9Y6I4 520 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 A0A087X1B8 175 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 TRIM43BA6NCK2 446 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
VPS52-218ENST00000482399 KPNA6O60684 536 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CD247P20963 164 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 RPS12P25398 132 aaKnown RBP12.72□□□□□ -0.37
VPS52-218ENST00000482399 MTPNP58546 118 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 GALNT3Q14435 633 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 TSTD2Q5T7W7 516 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 SPESP1Q6UW49 350 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 ERMP1Q7Z2K6 904 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CLYBLQ8N0X4 340 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CALML6Q8TD86 181 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 GLMNQ92990 594 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 COX4I2Q96KJ9 171 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 PPP1R10Q96QC0 940 aaKnown RBP12.72□□□□□ -0.37
VPS52-218ENST00000482399 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CD274Q9NZQ7 290 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 SQORQ9Y6N5 450 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 KANSL1LA0AUZ9 987 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 TMEM247A6NEH6 219 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 I6L893 689 aaPredicted RBP12.71□□□□□ -0.37
VPS52-218ENST00000482399 M0R3G1 203 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 NFKBIEO00221 500 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 AP1G1O43747 822 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 SYNCRIPO60506 623 aaKnown RBP12.71□□□□□ -0.37
VPS52-218ENST00000482399 PAGE1O75459 146 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 IMPDH2P12268 514 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 LBPP18428 481 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 ITGB6P18564 788 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 CDH3P22223 829 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 PNPLA4P41247 253 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 POU4F1Q01851 419 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 APOFQ13790 326 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 RGS21Q2M5E4 152 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 SLCO4A1Q96BD0 722 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 CDK15Q96Q40 435 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 VAT1Q99536 393 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 ABCG8Q9H221 673 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 ALG2Q9H553 416 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 SMPD3Q9NY59 655 aaPredicted RBP12.71□□□□□ -0.37
VPS52-218ENST00000482399 ABI2Q9NYB9 513 aaPredicted RBP12.71□□□□□ -0.37
VPS52-218ENST00000482399 RBPJLQ9UBG7 517 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 LIMD1Q9UGP4 676 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 CIDEBQ9UHD4 219 aa12.71□□□□□ -0.37
VPS52-218ENST00000482399 COL2A1P02458 1487 aaPredicted RBP12.71□□□□□ -0.38
VPS52-218ENST00000482399 MYO1GB0I1T2 1018 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 DDNO94850 711 aaPredicted RBP12.71□□□□□ -0.38
VPS52-218ENST00000482399 F9P00740 461 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 CYP4B1P13584 511 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 SERPINH1P50454 418 aaKnown RBP12.71□□□□□ -0.38
VPS52-218ENST00000482399 AFF1P51825 1210 aaKnown RBP12.71□□□□□ -0.38
VPS52-218ENST00000482399 ARHGAP1Q07960 439 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 GTF2H3Q13889 308 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 LRP8Q14114 963 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 HERC3Q15034 1050 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 ATP6AP1LQ52LC2 224 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 SLC22A9Q8IVM8 553 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 SLC15A3Q8IY34 581 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 CRYBG2Q8N1P7 616 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 FBXO39Q8N4B4 442 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 BORCS5Q969J3 196 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 MUS81Q96NY9 551 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 CHID1Q9BWS9 393 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 NACA2Q9H009 215 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 EPS8L2Q9H6S3 715 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 VPS45Q9NRW7 570 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.71□□□□□ -0.38
VPS52-218ENST00000482399 IFT80Q9P2H3 777 aaPredicted RBP12.71□□□□□ -0.38
VPS52-218ENST00000482399 UXTQ9UBK9 157 aaPredicted RBP12.71□□□□□ -0.38
VPS52-218ENST00000482399 ZMYM5Q9UJ78 669 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 TRIM17Q9Y577 477 aa12.71□□□□□ -0.38
VPS52-218ENST00000482399 BTN3A1O00481 513 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 ENPP3O14638 875 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 HS6ST1O60243 411 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 NPHS1O60500 1241 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 CAPN3P20807 821 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 ADSLP30566 484 aaPredicted RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 HOXA11P31270 313 aaPredicted RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 BRCC3P46736 316 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 MARC1Q5VT66 337 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 CIR1Q86X95 450 aaPredicted RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 CENPSQ8N2Z9 138 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 DQX1Q8TE96 717 aaKnown RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 NUDT8Q8WV74 236 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 SKA2Q8WVK7 121 aaPredicted RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 CENPNQ96H22 339 aaPredicted RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 ZBED3Q96IU2 234 aaPredicted RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 LOXHD1Q8IVV2 1947 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 SH3PXD2BA1X283 911 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 SCAMP3O14828 347 aaKnown RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 PRSS56P0CW18 603 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms