RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 AKAP13Q12802 2813 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 TDRD6O60522 2096 aaKnown RBP19.9■□□□□ 0.78
MSH5-215ENST00000482280 LY6G6EA0A0G2JKS1 128 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 NPIPB15A6NHN6 443 aaPredicted RBP19.9■□□□□ 0.78
MSH5-215ENST00000482280 PPP1R12AO14974 1030 aaPredicted RBP19.9■□□□□ 0.78
MSH5-215ENST00000482280 MTA2O94776 668 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 IPO7O95373 1038 aaKnown RBP19.9■□□□□ 0.78
MSH5-215ENST00000482280 ZNF30P17039 623 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 TRIM23P36406 574 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 ETV3P41162 512 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 AP1B1Q10567 949 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 PDK1Q15118 436 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 RBM44Q6ZP01 1051 aaKnown RBP19.9■□□□□ 0.78
MSH5-215ENST00000482280 BZW1Q7L1Q6 419 aaKnown RBP19.9■□□□□ 0.78
MSH5-215ENST00000482280 LSMEM2Q8N112 164 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 PQLC3Q8N755 202 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 DTD2Q96FN9 168 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 PDXPQ96GD0 296 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 RBM15Q96T37 977 aaKnown RBP eCLIP19.9■□□□□ 0.78
MSH5-215ENST00000482280 SUDS3Q9H7L9 328 aaPredicted RBP19.9■□□□□ 0.78
MSH5-215ENST00000482280 CYP4F12Q9HCS2 524 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 DTLQ9NZJ0 730 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 PNMA8BQ9ULN7 279 aaPredicted RBP19.9■□□□□ 0.78
MSH5-215ENST00000482280 U3KQA8 63 aa19.9■□□□□ 0.78
MSH5-215ENST00000482280 TMEM202A6NGA9 273 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 USP12O75317 370 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 TCEA3O75764 348 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 PYGLP06737 847 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 CYLC1P35663 651 aaPredicted RBP19.89■□□□□ 0.77
MSH5-215ENST00000482280 MAGEA1P43355 309 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 GPR1P46091 355 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 RPL26P61254 145 aaKnown RBP19.89■□□□□ 0.77
MSH5-215ENST00000482280 BIRC2Q13490 618 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 PEX6Q13608 980 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 SPIDRQ14159 915 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 CDCP2Q5VXM1 449 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 C19orf48Q6RUI8 117 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 CRTC1Q6UUV9 634 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 HSD11B1LQ7Z5J1 315 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 HEATR4Q86WZ0 1026 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 FAM46DQ8NEK8 389 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 HNRNPLLQ8WVV9 542 aaKnown RBP19.89■□□□□ 0.77
MSH5-215ENST00000482280 PIH1D2Q8WWB5 315 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 OR1E3Q8WZA6 343 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 NSMCE3Q96MG7 304 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 MCCC1Q96RQ3 725 aaPredicted RBP19.89■□□□□ 0.77
MSH5-215ENST00000482280 CCDC3Q9BQI4 270 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 ADGRE3Q9BY15 652 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 CARS2Q9HA77 564 aaKnown RBP19.89■□□□□ 0.77
MSH5-215ENST00000482280 FGF22Q9HCT0 170 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 RPL26L1Q9UNX3 145 aaKnown RBP19.89■□□□□ 0.77
MSH5-215ENST00000482280 CHKBQ9Y259 395 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.89■□□□□ 0.77
MSH5-215ENST00000482280 GPSM3Q9Y4H4 160 aa19.89■□□□□ 0.77
MSH5-215ENST00000482280 PRSS38A1L453 326 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 KCNK1O00180 336 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 JCHAINP01591 159 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 CELA2BP08218 269 aaPredicted RBP19.88■□□□□ 0.77
MSH5-215ENST00000482280 LHCGRP22888 699 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 PPIDQ08752 370 aaKnown RBP19.88■□□□□ 0.77
MSH5-215ENST00000482280 ILF3Q12906 894 aaKnown RBP eCLIP19.88■□□□□ 0.77
MSH5-215ENST00000482280 TFDP2Q14188 446 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 LRRC66Q68CR7 880 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 ALG1LQ6GMV1 187 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 Q6ZVL8 140 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 KYQ8NBH2 561 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 LPCAT1Q8NF37 534 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 KIAA1524Q8TCG1 905 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 RNF25Q96BH1 459 aaPredicted RBP19.88■□□□□ 0.77
MSH5-215ENST00000482280 AP2M1Q96CW1 435 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 TDRD1Q9BXT4 1180 aaKnown RBP19.88■□□□□ 0.77
MSH5-215ENST00000482280 GSDMCQ9BYG8 508 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 BRD8Q9H0E9 1235 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 DPEP2Q9H4A9 486 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 PCDH9Q9HC56 1237 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 MRPL40Q9NQ50 206 aaKnown RBP19.88■□□□□ 0.77
MSH5-215ENST00000482280 SEPT10Q9P0V9 454 aa19.88■□□□□ 0.77
MSH5-215ENST00000482280 ANKRD36A6QL64 1941 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 A0A0J9YYE9 177 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 BRINP1O60477 761 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 TRBC1P01850 177 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 HLA-DQB2P05538 268 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 PDHA1P08559 390 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 COMTP21964 271 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 TGM2P21980 687 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 TNNT3P45378 269 aaPredicted RBP19.87■□□□□ 0.77
MSH5-215ENST00000482280 ABCG1P45844 678 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 DYNLT1P63172 113 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 GABREP78334 506 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 CDK3Q00526 305 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 TBX2Q13207 712 aaPredicted RBP19.87■□□□□ 0.77
MSH5-215ENST00000482280 ISXQ2M1V0 245 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 TSPAN33Q86UF1 283 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 CCDC170Q8IYT3 715 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 CCHCR1Q8TD31 782 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 FGF11Q92914 225 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 LGMNQ99538 433 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 LGR4Q9BXB1 951 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 TEX101Q9BY14 249 aa19.87■□□□□ 0.77
MSH5-215ENST00000482280 PPIL1Q9Y3C6 166 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms