RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 ASAP2O43150 1006 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 MSI1O43347 362 aaKnown RBP6.31□□□□□ -1.4
PBRM1-220ENST00000480064 RTN2O75298 545 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 NDUFA10O95299 355 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 ITGAXP20702 1163 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 SFPQP23246 707 aaKnown RBP eCLIP6.31□□□□□ -1.4
PBRM1-220ENST00000480064 CHRNA5P30532 468 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 PCGF2P35227 344 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 SCNN1GP51170 649 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 STX1BP61266 288 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 ITGA7Q13683 1181 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 CAPSQ13938 189 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 GALNT3Q14435 633 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 TAF7Q15545 349 aaPredicted RBP6.31□□□□□ -1.4
PBRM1-220ENST00000480064 ETFRF1Q6IPR1 90 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 TCTN3Q6NUS6 607 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 WDR73Q6P4I2 378 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 ANKRD16Q6P6B7 361 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 VWA1Q6PCB0 445 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 TMEM65Q6PI78 240 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 ABRAXAS1Q6UWZ7 409 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 VSTM1Q6UX27 236 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 RANBP10Q6VN20 620 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 C16orf71Q8IYS4 520 aaPredicted RBP6.31□□□□□ -1.4
PBRM1-220ENST00000480064 BCAS4Q8TDM0 211 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 INTS14Q96SY0 518 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 SYT17Q9BSW7 474 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 GOLPH3LQ9H4A5 285 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 DUSP22Q9NRW4 184 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 PPP4R1LQ9P1A2 415 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 CRNNQ9UBG3 495 aaPredicted RBP6.31□□□□□ -1.4
PBRM1-220ENST00000480064 IL17BQ9UHF5 180 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 SH3BGRL2Q9UJC5 107 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 LEF1Q9UJU2 399 aaPredicted RBP6.31□□□□□ -1.4
PBRM1-220ENST00000480064 CDH7Q9ULB5 785 aa6.31□□□□□ -1.4
PBRM1-220ENST00000480064 RNF103-CHMP3A0A140T963 221 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 A0A1B0GVM2 712 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 NPEPPSL1A6NEC2 478 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 RNF103O00237 685 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 CLIC1O00299 241 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 PEX1O43933 1283 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 PRPSAP2O60256 369 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 SIX3O95343 332 aaPredicted RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 OLFM2O95897 454 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 IGHDP01880 384 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 EEF2P13639 858 aaKnown RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 IL10P22301 178 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 PTPN3P26045 913 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 CLDN2P57739 230 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 ZBTB16Q05516 673 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 LASP1Q14847 261 aaKnown RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 RRS1Q15050 365 aaKnown RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 KRT24Q2M2I5 525 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 BEAN1Q3B7T3 259 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 TOR1AIP1Q5JTV8 583 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 TMEM211Q6ICI0 200 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 LRRC8EQ6NSJ5 796 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 CASC1Q6TDU7 716 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 DCDC5Q6ZRR9 648 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 DSG4Q86SJ6 1040 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 UEVLDQ8IX04 471 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 LILRB1Q8NHL6 650 aaPredicted RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 CFAP61Q8NHU2 1237 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 CELF1Q92879 486 aaKnown RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 RRNAD1Q96FB5 475 aaKnown RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 LINC00615Q96LM1 132 aaPredicted RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 RMDN2Q96LZ7 410 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 C16orf45Q96MC5 204 aaPredicted RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 ZNF830Q96NB3 372 aaPredicted RBP6.3□□□□□ -1.4
PBRM1-220ENST00000480064 PRAM1Q96QH2 718 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 CIPCQ9C0C6 399 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 ANKFY1Q9P2R3 1169 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 COPG2Q9UBF2 871 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 CHKBQ9Y259 395 aa6.3□□□□□ -1.4
PBRM1-220ENST00000480064 XDHP47989 1333 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.29□□□□□ -1.4
PBRM1-220ENST00000480064 SYCE3A1L190 88 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 MAGEB17A8MXT2 336 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 KDM4EB2RXH2 506 aaPredicted RBP6.29□□□□□ -1.4
PBRM1-220ENST00000480064 AKR1B15C9JRZ8 316 aaPredicted RBP6.29□□□□□ -1.4
PBRM1-220ENST00000480064 EBAG9O00559 213 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 IFIT3O14879 490 aaKnown RBP6.29□□□□□ -1.4
PBRM1-220ENST00000480064 PLRG1O43660 514 aaKnown RBP6.29□□□□□ -1.4
PBRM1-220ENST00000480064 ATP2C2O75185 946 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 DAB1O75553 588 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 HMOX1P09601 288 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 EBLN1P0CF75 366 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 APEHP13798 732 aaKnown RBP6.29□□□□□ -1.4
PBRM1-220ENST00000480064 AGAP20933 346 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 COMTP21964 271 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 ACHEP22303 614 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 GPTP24298 496 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 HIBADHP31937 336 aaKnown RBP6.29□□□□□ -1.4
PBRM1-220ENST00000480064 SOAT1P35610 550 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 ZNF84P51523 738 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 SUOXP51687 545 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 EEFSECP57772 596 aaKnown RBP6.29□□□□□ -1.4
PBRM1-220ENST00000480064 TAS2R40P59535 323 aa6.29□□□□□ -1.4
PBRM1-220ENST00000480064 GRSF1Q12849 480 aaKnown RBP eCLIP6.29□□□□□ -1.4
PBRM1-220ENST00000480064 NPRL3Q12980 569 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms