RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 OGG1O15527 345 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 TLX3O43711 291 aaPredicted RBP5.25□□□□□ -1.57
UPF3B-203ENST00000478840 PSMD10O75832 226 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 MTA2O94776 668 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 GGPS1O95749 300 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 CCDC175P0C221 793 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 ANXA7P20073 488 aaKnown RBP5.25□□□□□ -1.57
UPF3B-203ENST00000478840 THPOP40225 353 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 MSH2P43246 934 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 SUOXP51687 545 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 SORDQ00796 357 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 ITGADQ13349 1161 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 CAPSQ13938 189 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 KCNC3Q14003 757 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 ARHGEF6Q15052 776 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 C2orf68Q2NKX9 166 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 COLEC12Q5KU26 742 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 KIAA1614Q5VZ46 1190 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 HIST2H2BCQ6DN03 193 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 HIST2H2BDQ6DRA6 164 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 TMEM71Q6P5X7 295 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 DLK2Q6UY11 383 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 HAPLN4Q86UW8 402 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 LDLRAD3Q86YD5 345 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 SFTPA2Q8IWL1 248 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 Q8NFD4 153 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 NSMCE1Q8WV22 266 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 VPS33AQ96AX1 596 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 EME1Q96AY2 570 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 MOAP1Q96BY2 351 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 AGAP2Q99490 1192 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 FAM118BQ9BPY3 351 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 SCNM1Q9BWG6 230 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 THSD1Q9NS62 852 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 TMEM45AQ9NWC5 275 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 PAG1Q9NWQ8 432 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 MTMR10Q9NXD2 777 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 KLHL13Q9P2N7 655 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 UBA2Q9UBT2 640 aaPredicted RBP5.25□□□□□ -1.57
UPF3B-203ENST00000478840 OSGIN1Q9UJX0 560 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 FBXW11Q9UKB1 542 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 ERVK-11Q9UQG0 969 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 POLR2AP24928 1970 aaKnown RBP5.24□□□□□ -1.57
UPF3B-203ENST00000478840 TRBC2A0A5B9 178 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 ZC3H11AO75152 810 aaKnown RBP eCLIP5.24□□□□□ -1.57
UPF3B-203ENST00000478840 GPC4O75487 556 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 FTCDO95954 541 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 ADRB1P08588 477 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 CTSAP10619 480 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 MMP9P14780 707 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 MYF6P23409 242 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 CPT2P23786 658 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 HOXC9P31274 260 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 RBP5P82980 135 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 BFSP1Q12934 665 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 COG2Q14746 738 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 SMTNL2Q2TAL5 461 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 PCSK4Q6UW60 755 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 DPPA4Q7L190 304 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 AACSQ86V21 672 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 ARID3BQ8IVW6 561 aaPredicted RBP5.24□□□□□ -1.57
UPF3B-203ENST00000478840 FAM217AQ8IXS0 508 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 CCDC13Q8IYE1 715 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 THNSL1Q8IYQ7 743 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 GALNT16Q8N428 558 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 GUF1Q8N442 669 aaKnown RBP5.24□□□□□ -1.57
UPF3B-203ENST00000478840 ATP6V1E2Q96A05 226 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 TMEM18Q96B42 140 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 ARSGQ96EG1 525 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 VMP1Q96GC9 406 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 VCPIP1Q96JH7 1222 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 ACOX2Q99424 681 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 SYT17Q9BSW7 474 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 MSTO1Q9BUK6 570 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 ANKRD2Q9GZV1 360 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 MAGIXQ9H6Y5 334 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 MKKSQ9NPJ1 570 aaPredicted RBP5.24□□□□□ -1.57
UPF3B-203ENST00000478840 CYSLTR2Q9NS75 346 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 CRNNQ9UBG3 495 aaPredicted RBP5.24□□□□□ -1.57
UPF3B-203ENST00000478840 AMACRQ9UHK6 382 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 MYRFQ9Y2G1 1151 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 STON1Q9Y6Q2 735 aa5.24□□□□□ -1.57
UPF3B-203ENST00000478840 FLT1P17948 1338 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 GAGE12JA6NER3 117 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 A6NL46 340 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 AKR1B15C9JRZ8 316 aaPredicted RBP5.23□□□□□ -1.57
UPF3B-203ENST00000478840 CHL1O00533 1208 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 MATN3O15232 486 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 CNOT3O75175 753 aaKnown RBP5.23□□□□□ -1.57
UPF3B-203ENST00000478840 NDUFB4O95168 129 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 IGLV2-14P01704 120 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 FYNP06241 537 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 TFPIP10646 304 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 MUTP22033 750 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 PRCPP42785 496 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 MMP14P50281 582 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 GPR143P51810 404 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 RAD23BP54727 409 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 DDR1Q08345 913 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 FOXF2Q12947 444 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms