RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 HDAC4P56524 1084 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 AMPD3Q01432 767 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 GNA12Q03113 381 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 ILF3Q12906 894 aaKnown RBP eCLIP12.21□□□□□ -0.45
HDAC8-217ENST00000478743 RALGDSQ12967 914 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 AGERQ15109 404 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 EFHC1Q5JVL4 640 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 DUS1LQ6P1R4 473 aaKnown RBP12.21□□□□□ -0.45
HDAC8-217ENST00000478743 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 DRC7Q8IY82 874 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 NXPE1Q8N323 547 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 THAP4Q8WY91 577 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 ISG20Q96AZ6 181 aaKnown RBP12.21□□□□□ -0.45
HDAC8-217ENST00000478743 HMCESQ96FZ2 354 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 TMX3Q96JJ7 454 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 OR6C1Q96RD1 312 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 OSBPL1AQ9BXW6 950 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 CUEDC2Q9H467 287 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 LHX9Q9NQ69 397 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 SUFUQ9UMX1 484 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 TRAF3IP3Q9Y228 551 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 PCDHGB7Q9Y5F8 929 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 COPG1Q9Y678 874 aaKnown RBP12.21□□□□□ -0.45
HDAC8-217ENST00000478743 FER1L5A0AVI2 2057 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 IGLV3-10A0A075B6K4 115 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 ILVBLA1L0T0 632 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 TEX33O43247 280 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 RECQL5O94762 991 aaPredicted RBP12.2□□□□□ -0.46
HDAC8-217ENST00000478743 F9P00740 461 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 CD99P14209 185 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 GARSP41250 739 aaKnown RBP12.2□□□□□ -0.46
HDAC8-217ENST00000478743 POLD2P49005 469 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 CDK17Q00537 523 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 ART3Q13508 389 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 SLC39A14Q15043 492 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.2□□□□□ -0.46
HDAC8-217ENST00000478743 WDR74Q6RFH5 385 aaPredicted RBP12.2□□□□□ -0.46
HDAC8-217ENST00000478743 SHC4Q6S5L8 630 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 CUZD1Q86UP6 607 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 KCNMB4Q86W47 210 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 RASGRP3Q8IV61 690 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 OR10G6Q8NH81 332 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 ADAMTS17Q8TE56 1095 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 SMAD5Q99717 465 aaKnown RBP12.2□□□□□ -0.46
HDAC8-217ENST00000478743 TKTL2Q9H0I9 626 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 THAP9Q9H5L6 903 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 KIAA1257Q9ULG3 409 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 B3GNT3Q9Y2A9 372 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 PCDHB4Q9Y5E5 795 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 CSAG2Q9Y5P2 127 aa12.2□□□□□ -0.46
HDAC8-217ENST00000478743 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 ZW10O43264 779 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 SPAG6O75602 509 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 POP4O95707 220 aaKnown RBP12.19□□□□□ -0.46
HDAC8-217ENST00000478743 HTR1EP28566 365 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 PTPN4P29074 926 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 TRIM23P36406 574 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 ACTR1BP42025 376 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 NOP2P46087 812 aaKnown RBP12.19□□□□□ -0.46
HDAC8-217ENST00000478743 FASLGP48023 281 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 SEPHS1P49903 392 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 NDST2P52849 883 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 MCCD1P59942 119 aaPredicted RBP12.19□□□□□ -0.46
HDAC8-217ENST00000478743 ACTR1AP61163 376 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 SNRPD1P62314 119 aaKnown RBP12.19□□□□□ -0.46
HDAC8-217ENST00000478743 SLC20A2Q08357 652 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 NFATC2Q13469 925 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 FNIP1Q8TF40 1166 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 EXOC2Q96KP1 924 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 SLC38A3Q99624 504 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 FRMD8Q9BZ67 464 aaPredicted RBP12.19□□□□□ -0.46
HDAC8-217ENST00000478743 WDR26Q9H7D7 661 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 ARHGEF38Q9NXL2 777 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 AJAP1Q9UKB5 411 aaPredicted RBP12.19□□□□□ -0.46
HDAC8-217ENST00000478743 PADI1Q9ULC6 663 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 KLF2Q9Y5W3 355 aaPredicted RBP12.19□□□□□ -0.46
HDAC8-217ENST00000478743 MYO7BQ6PIF6 2116 aa12.19□□□□□ -0.46
HDAC8-217ENST00000478743 C21orf140B9A014 251 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 CALUO43852 315 aaPredicted RBP12.18□□□□□ -0.46
HDAC8-217ENST00000478743 TMCC1O94876 653 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 CA5AP35218 305 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
HDAC8-217ENST00000478743 ADCY8P40145 1251 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 GLRBP48167 497 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 ELP6Q0PNE2 266 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 RAPGEF1Q13905 1077 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 TRIM62Q9BVG3 475 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 TBC1D10AQ9BXI6 508 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 ILKAPQ9H0C8 392 aaPredicted RBP12.18□□□□□ -0.46
HDAC8-217ENST00000478743 ZBTB20Q9HC78 741 aaPredicted RBP12.18□□□□□ -0.46
HDAC8-217ENST00000478743 GPR83Q9NYM4 423 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 OGFRQ9NZT2 677 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 MAPK8IP1Q9UQF2 711 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 NEU2Q9Y3R4 380 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 PCYT1BQ9Y5K3 369 aaPredicted RBP12.18□□□□□ -0.46
HDAC8-217ENST00000478743 PIKFYVEQ9Y2I7 2098 aa12.18□□□□□ -0.46
HDAC8-217ENST00000478743 TSPAN11A1L157 253 aa12.17□□□□□ -0.46
HDAC8-217ENST00000478743 KIAA1324LA8MWY0 1029 aaPredicted RBP12.17□□□□□ -0.46
HDAC8-217ENST00000478743 POLR2DO15514 142 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms