RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 TBC1D23Q9NUY8 699 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 ZBTB42B2RXF5 422 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 CHRNGP07510 517 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 VAC14Q08AM6 782 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 TRAF2Q12933 501 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 OTUD3Q5T2D3 398 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-220ENST00000477528 ADCY4Q8NFM4 1077 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 DNAJB14Q8TBM8 379 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 BRSK1Q8TDC3 778 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 GPR22Q99680 433 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 SLC7A8Q9UHI5 535 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 RAI2Q9Y5P3 530 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 hCG_2014768A0A024R1R8 64 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 A0A0J9YYE9 177 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 MOXD2PA6NHM9 499 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 ZNF682O95780 498 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 PRIM2P49643 509 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 MLLT6P55198 1093 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-220ENST00000477528 CNSTQ6PJW8 725 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 P3H2Q8IVL5 708 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 TERB1Q8NA31 727 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 LZICQ8WZA0 190 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 SKA1Q96BD8 255 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 DNAJC1Q96KC8 554 aaKnown RBP14.64□□□□□ -0.07
HDAC6-220ENST00000477528 SPATA16Q9BXB7 569 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 TEX12Q9BXU0 123 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 STK39Q9UEW8 545 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 LIMD1Q9UGP4 676 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 DYRK1BQ9Y463 629 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 PSAT1Q9Y617 370 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 CPSF4O95639 269 aaKnown RBP14.64□□□□□ -0.07
HDAC6-220ENST00000477528 GOT2P00505 430 aaKnown RBP14.64□□□□□ -0.07
HDAC6-220ENST00000477528 SERPIND1P05546 499 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 EPB42P16452 691 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 MSX2P35548 267 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-220ENST00000477528 SOAT1P35610 550 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 PITX1P78337 314 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-220ENST00000477528 PRKCZQ05513 592 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 SLC9B1Q4ZJI4 515 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 CIR1Q86X95 450 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-220ENST00000477528 RBFAQ8N0V3 343 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 OR9Q1Q8NGQ5 310 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 RNF217Q8TC41 542 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 C2orf15Q8WU43 125 aaKnown RBP14.64□□□□□ -0.07
HDAC6-220ENST00000477528 RNF208Q9H0X6 261 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 MOCS1Q9NZB8 636 aa14.64□□□□□ -0.07
HDAC6-220ENST00000477528 ZBTB14O43829 449 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 KCNH1O95259 989 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 CCT8P50990 548 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 NUP107P57740 925 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 OLIG2Q13516 323 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 DNAJC14Q6Y2X3 702 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-220ENST00000477528 OR7D4Q8NG98 312 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 POMPQ9Y244 141 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 TBC1D30Q9Y2I9 924 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 WASF2Q9Y6W5 498 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 TRAV19A0A0A6YYK7 116 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 CTPS1P17812 591 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 VCLP18206 1134 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 AOC1P19801 751 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 OGNP20774 298 aaKnown RBP14.63□□□□□ -0.07
HDAC6-220ENST00000477528 DNAJB1P25685 340 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 S100A3P33764 101 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 LRRC74AQ0VAA2 488 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 PEX6Q13608 980 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 PCLAFQ15004 111 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 SCIMPQ6UWF3 145 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 CTU1Q7Z7A3 348 aaKnown RBP14.63□□□□□ -0.07
HDAC6-220ENST00000477528 TMEM161AQ9NX61 479 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 THSD7AQ9UPZ6 1657 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 A0A1B0GVM2 712 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 TCAF2A6NFQ2 919 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 BEST1O76090 585 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 C1RP00736 705 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 ERAP2Q6P179 960 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 CCDC149Q6ZUS6 474 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 SPATA19Q7Z5L4 167 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 FEM1CQ96JP0 617 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 TCF12Q99081 682 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 KIFC1Q9BW19 673 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 SPG21Q9NZD8 308 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 HS3ST4Q9Y661 456 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 AP4B1Q9Y6B7 739 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 ZFP37Q9Y6Q3 630 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-220ENST00000477528 GNG14A0A1W2PPG7 69 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 PRMT5O14744 637 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-220ENST00000477528 DCLK1O15075 740 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 ULK1O75385 1050 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 PBLDP30039 288 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-220ENST00000477528 LPCAT2Q7L5N7 544 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 TMEM132CQ8N3T6 1108 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 CHCHD3Q9NX63 227 aaKnown RBP14.63□□□□□ -0.07
HDAC6-220ENST00000477528 DNAJB4Q9UDY4 337 aa14.63□□□□□ -0.07
HDAC6-220ENST00000477528 INSIG1O15503 277 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 GJA9P57773 515 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 CREMQ03060 361 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 CDHR3Q6ZTQ4 885 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 STK32CQ86UX6 486 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 AADATQ8N5Z0 425 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 ACTRT2Q8TDY3 377 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms