RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 HMGN1P05114 100 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CYP1A2P05177 515 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 FCER1AP12319 257 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ZNF26P17031 533 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 GAP43P17677 238 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ITGAXP20702 1163 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CD247P20963 164 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ME2P23368 584 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CXCR2P25025 360 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TYK2P29597 1187 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 EPHX2P34913 555 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 BTDP43251 543 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CBX5P45973 191 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 SLC26A2P50443 739 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 SERPINB9P50453 376 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ETV1P50549 477 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TPTEP56180 551 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 MAP3K7CLP57077 242 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 DEFA1P59665 94 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 DEFA3P59666 94 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 IFITM2Q01629 132 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ARID5AQ03989 594 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 KDSRQ06136 332 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 SCRN3Q0VDG4 424 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TROAPQ12815 778 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TOP3AQ13472 1001 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 SLC12A1Q13621 1099 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 PRKG1Q13976 671 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 PDK1Q15118 436 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CDK10Q15131 360 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 DLG2Q15700 870 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TYSND1Q2T9J0 566 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 LEXMQ3ZCV2 418 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CEP55Q53EZ4 464 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 FAXCQ5TGI0 409 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 AGAP9Q5VTM2 703 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 FKBP1CQ5VVH2 108 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 UGT3A1Q6NUS8 523 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 DPY19L2P1Q6NXN4 242 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TTC33Q6PID6 262 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 STXBP4Q6ZWJ1 553 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ZNF767PQ75MW2 155 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 HEATR3Q7Z4Q2 680 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 AMIGO2Q86SJ2 522 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 PRUNE1Q86TP1 453 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 DGKHQ86XP1 1220 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CAMK1DQ8IU85 385 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 RIOX2Q8IUF8 465 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 APOBEC3FQ8IUX4 373 aaKnown RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 UNC45BQ8IWX7 931 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 C12orf56Q8IXR9 622 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ADGRF2Q8IZF7 708 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 GALNT4Q8N4A0 578 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 SLC15A4Q8N697 577 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 OR10Z1Q8NGY1 313 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 RP9Q8TA86 221 aaKnown RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 LHFPL5Q8TAF8 219 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 BLOC1S5Q8TDH9 187 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 PDCD6IPQ8WUM4 868 aaKnown RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CAPSLQ8WWF8 208 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 RAD54LQ92698 747 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ATP2A3Q93084 1043 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 DCPSQ96C86 337 aaKnown RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 GIMAP5Q96F15 307 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 SH3YL1Q96HL8 342 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 METTL2AQ96IZ6 378 aaKnown RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 MAELQ96JY0 434 aaKnown RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 FAR2Q96K12 515 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CEP295NLQ96MC4 621 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CDK5RAP1Q96SZ6 601 aaKnown RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TMEM79Q9BSE2 394 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 NPLQ9BXD5 320 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 KCNN2Q9H2S1 579 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 EPS8L2Q9H6S3 715 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ACAD9Q9H845 621 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 VPS37BQ9H9H4 285 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TM9SF3Q9HD45 589 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 PNPLA8Q9NP80 782 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 FBXO6Q9NRD1 293 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 KCND2Q9NZV8 630 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 SIRPGQ9P1W8 387 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 GULP1Q9UBP9 304 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 VTI1BQ9UEU0 232 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ANAPC2Q9UJX6 822 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 KIAA1257Q9ULG3 409 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 VPS4AQ9UN37 437 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CAB39Q9Y376 341 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 GRIP1Q9Y3R0 1128 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TRAF6Q9Y4K3 522 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 EMSYQ7Z589 1322 aa4.73□□□□□ -1.65
PTCD3-212ENST00000477520 ADGRA2Q96PE1 1338 aa4.73□□□□□ -1.65
PTCD3-212ENST00000477520 POLR2AP24928 1970 aaKnown RBP4.73□□□□□ -1.65
PTCD3-212ENST00000477520 C1orf232A0A0U1RR37 186 aa4.73□□□□□ -1.65
PTCD3-212ENST00000477520 TCRBV5S4A2TA0A5A2 114 aa4.73□□□□□ -1.65
PTCD3-212ENST00000477520 RGSL1A5PLK6 1076 aa4.73□□□□□ -1.65
PTCD3-212ENST00000477520 GOLGA8IPA6NC78 632 aa4.73□□□□□ -1.65
PTCD3-212ENST00000477520 SMCO2A6NFE2 343 aa4.73□□□□□ -1.65
PTCD3-212ENST00000477520 MYMKA6NI61 221 aa4.73□□□□□ -1.65
PTCD3-212ENST00000477520 TRPC5OSA6NMA1 111 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms