RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TSTD2Q5T7W7 516 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 XAF1Q6GPH4 301 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 PLEKHG7Q6ZR37 379 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 STRADAQ7RTN6 431 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 TLK2Q86UE8 772 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 RDH12Q96NR8 316 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 TSPAN18Q96SJ8 248 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 C16orf70Q9BSU1 422 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 AP5M1Q9H0R1 490 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 POMKQ9H5K3 350 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 ZSWIM8A7E2V4 1837 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 ZNF638Q14966 1978 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 GMNNO75496 209 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 LDLRP01130 860 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 INSRRP14616 1297 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 SERPINB10P48595 397 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 MLLT10P55197 1068 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 PAFAH1B3Q15102 231 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 PKDCCQ504Y2 493 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 MFSD14CQ5VZR4 134 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 EFCAB12Q6NXP0 572 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 LINC00523Q86TU6 105 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 LRRC71Q8N4P6 559 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 DNAAF3Q8N9W5 541 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 TRAPPC12Q8WVT3 735 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 HDAC2Q92769 488 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 TRMOQ9BU70 441 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 LHPPQ9H008 270 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 HPS4Q9NQG7 708 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 SFMBT1Q9UHJ3 866 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 ATP11BQ9Y2G3 1177 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 VWA7Q9Y334 891 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 IGKV6-21A0A0C4DH24 114 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 ARPC2O15144 300 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 ITGB3P05106 788 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 HOXD8P13378 290 aaPredicted RBP15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 GOT1P17174 413 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 TKTP29401 623 aaKnown RBP15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 GLRBP48167 497 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 FLT3LGP49771 235 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 RGS7P49802 495 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 CPT1AP50416 773 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 NDST1P52848 882 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 RAD23AP54725 363 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 CDC20Q12834 499 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 TOP3AQ13472 1001 aaPredicted RBP15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 AASDHQ4L235 1098 aaPredicted RBP15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 CNSTQ6PJW8 725 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 TXNDC5Q8NBS9 432 aaKnown RBP15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 GPR78Q96P69 363 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 CYP2S1Q96SQ9 504 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 CPNE5Q9HCH3 593 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 PTPRHQ9HD43 1115 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 FBXO8Q9NRD0 319 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 SEPT10Q9P0V9 454 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 KLHL8Q9P2G9 620 aaPredicted RBP15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 ANAPC2Q9UJX6 822 aa15.27■□□□□ 0.04
CLSTN1-205ENST00000477264 COL1A2P08123 1366 aa15.27■□□□□ 0.03
CLSTN1-205ENST00000477264 ZFC3H1O60293 1989 aaKnown RBP15.27■□□□□ 0.03
CLSTN1-205ENST00000477264 RGS13O14921 159 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 MTSS1O43312 755 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 TPD52L2O43399 206 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 NCAM1P13591 858 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 AKR1A1P14550 325 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 STMN1P16949 149 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 POLR2EP19388 210 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 POLR2IP36954 125 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 GRM5P41594 1212 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 ABCG1P45844 678 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 TKTL1P51854 596 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 PLA2G16P53816 162 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 GJA9P57773 515 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 LAMTOR4Q0VGL1 99 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 ATF7IP2Q5U623 682 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 TMEM214Q6NUQ4 689 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 LAYNQ6UX15 382 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 PID1Q7Z2X4 250 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 SPPL2CQ8IUH8 684 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 CNTN4Q8IWV2 1026 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 BPIFB6Q8NFQ5 453 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 MOCOSQ96EN8 888 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 MFSD3Q96ES6 412 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 TRIM54Q9BYV2 358 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 ING2Q9H160 280 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 EHD1Q9H4M9 534 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 SP140LQ9H930 580 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 MTRRQ9UBK8 725 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 GABRQQ9UN88 632 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 Q9Y3F1 56 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 FAM149AA5PLN7 773 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 SYNCRIPO60506 623 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 CLIC3O95833 236 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 ETFBP38117 255 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 ARPC4P59998 168 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 EPS8Q12929 822 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 MAPRE1Q15691 268 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 KCTD11Q693B1 232 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 TAF2Q6P1X5 1199 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 PDZD4Q76G19 769 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms