RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 MYO6Q9UM54 1294 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 PLEKHM1Q9Y4G2 1056 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 LOXL2Q9Y4K0 774 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 ST14Q9Y5Y6 855 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 UNC13CQ8NB66 2214 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 SETXQ7Z333 2677 aaKnown RBP11.67□□□□□ -0.54
VARS2-208ENST00000477052 PIEZO2Q9H5I5 2752 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 PRAMEF33A0A0G2JMD5 474 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 NPIPB15A6NHN6 443 aaPredicted RBP11.67□□□□□ -0.54
VARS2-208ENST00000477052 H3BRJ5 948 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 K7ENP7 123 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 B4GAT1O43505 415 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 MAFKO60675 156 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 PRAMEF10O60809 474 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 MAP3K6O95382 1288 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 CPP00450 1065 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 ITGA2BP08514 1039 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 CD48P09326 243 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 JMJD7P0C870 316 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 RARAP10276 462 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 TRIM23P36406 574 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 GNPDA1P46926 289 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 HCAR3P49019 387 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 MAPK10P53779 464 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 OR1D5P58170 312 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 POLR2LP62875 67 aaKnown RBP11.67□□□□□ -0.54
VARS2-208ENST00000477052 RHDQ02161 417 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 ARHGEF7Q14155 803 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 HLTFQ14527 1009 aaKnown RBP eCLIP11.67□□□□□ -0.54
VARS2-208ENST00000477052 RFTN1Q14699 578 aaPredicted RBP11.67□□□□□ -0.54
VARS2-208ENST00000477052 C14orf28Q4W4Y0 310 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 CERCAMQ5T4B2 595 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 PHF19Q5T6S3 580 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 CAVIN1Q6NZI2 390 aaKnown RBP11.67□□□□□ -0.54
VARS2-208ENST00000477052 INO80CQ6PI98 192 aaPredicted RBP11.67□□□□□ -0.54
VARS2-208ENST00000477052 OGFOD3Q6PK18 319 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 SLC30A9Q6PML9 568 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 TMCO3Q6UWJ1 677 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 Q6ZVL8 140 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 USP53Q70EK8 1073 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 SPRED1Q7Z699 444 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 TRIM74Q86UV6 250 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 VASH2Q86V25 355 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 ZFAND4Q86XD8 727 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 ATL2Q8NHH9 583 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 WDR48Q8TAF3 677 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 GRAMD1AQ96CP6 724 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 THAP2Q9H0W7 228 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 PCDH18Q9HCL0 1135 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 NT5MQ9NPB1 228 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 DONSONQ9NYP3 566 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 FOXJ2Q9P0K8 574 aa11.67□□□□□ -0.54
VARS2-208ENST00000477052 ARHGEF17Q96PE2 2063 aaPredicted RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 TENM4Q6N022 2769 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 TRBV23OR9-2A0A075B6M9 112 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 A0A1B0GTH6 734 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 CFAP69A5D8W1 941 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 EIF3CLB5ME19 914 aaKnown RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 HTRA2O43464 458 aaPredicted RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 HEXIM1O94992 359 aaKnown RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 FGF1P05230 155 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 CEACAM5P06731 702 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 PDHA1P08559 390 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 GZMAP12544 262 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 GLB1P16278 677 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 CR2P20023 1033 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 MPSTP25325 297 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 ALDH4A1P30038 563 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 VIPR1P32241 457 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 GJC1P36383 396 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 ARL4AP40617 200 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 PRKCIP41743 596 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 SSR1P43307 286 aaKnown RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 RENBPP51606 427 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 B4GALNT1Q00973 533 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 IHHQ14623 411 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 DPYSL2Q16555 572 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 FILIP1LQ4L180 1135 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 ATP13A4Q4VNC1 1196 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 NKAIN2Q5VXU1 208 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 RAET1GQ6H3X3 334 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 MARK2Q7KZI7 788 aaKnown RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 LSM14AQ8ND56 463 aaKnown RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 RCBTB1Q8NDN9 531 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 CPLX3Q8WVH0 158 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 JPH3Q8WXH2 748 aaPredicted RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 NUDCD1Q96RS6 583 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 CCNL2Q96S94 520 aaPredicted RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 EIF3CQ99613 913 aaKnown RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 NUDT22Q9BRQ3 303 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 STRADBQ9C0K7 418 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 NAT10Q9H0A0 1025 aaKnown RBP11.66□□□□□ -0.54
VARS2-208ENST00000477052 APPL1Q9UKG1 709 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 SUFUQ9UMX1 484 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 TMEM98Q9Y2Y6 226 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 SCINQ9Y6U3 715 aa11.66□□□□□ -0.54
VARS2-208ENST00000477052 SCN8AQ9UQD0 1980 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 SMTNL1A8MU46 457 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms