RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PAX7P23759 505 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 INHBCP55103 352 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 IHHQ14623 411 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 ZNF423Q2M1K9 1284 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 RASIP1Q5U651 963 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 TMEM198Q66K66 360 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 MRNIPQ6NTE8 343 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 RNF135Q8IUD6 432 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 SLC39A11Q8N1S5 342 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 BBS5Q8N3I7 341 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 SEMA3CQ99985 751 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 TMEM106CQ9BVX2 250 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 UNKQ9C0B0 810 aaKnown RBP16.49■□□□□ 0.23
TMEM53-208ENST00000476724 WDR41Q9HAD4 459 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 NEMP2A6NFY4 417 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 H3BNX3 289 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 GLP2RO95838 553 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 HNRNPLP14866 589 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM53-208ENST00000476724 STX5Q13190 355 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 C5orf22Q49AR2 442 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 C16orf59Q7L2K0 433 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 CUZD1Q86UP6 607 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 TMEM199Q8N511 208 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 BRSK1Q8TDC3 778 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 C2orf15Q8WU43 125 aaKnown RBP16.48■□□□□ 0.23
TMEM53-208ENST00000476724 L3HYPDHQ96EM0 354 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 ZNF558Q96NG5 402 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 ASB2Q96Q27 587 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 CLSTN3Q9BQT9 956 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 POPDC3Q9HBV1 291 aa16.48■□□□□ 0.23
TMEM53-208ENST00000476724 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM53-208ENST00000476724 LAMA2P24043 3122 aaKnown RBP16.48■□□□□ 0.23
TMEM53-208ENST00000476724 SOD2P04179 222 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 ZDHHC11BP0C7U3 371 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 ME2P23368 584 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 ARSDP51689 593 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 NFKB2Q00653 900 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 SQLEQ14534 574 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 ZNF235Q14590 738 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 OR52E8Q6IFG1 317 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 KIAA1841Q6NSI8 718 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 EFCAB3Q8N7B9 438 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 HIPK4Q8NE63 616 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 DLG3Q92796 817 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 CDK5RAP1Q96SZ6 601 aaKnown RBP16.47■□□□□ 0.23
TMEM53-208ENST00000476724 MRPL1Q9BYD6 325 aaKnown RBP16.47■□□□□ 0.23
TMEM53-208ENST00000476724 HACD3Q9P035 362 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 TCAF2A6NFQ2 919 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 TMEM233B4DJY2 109 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 SEC24AO95486 1093 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 HMBSP08397 361 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 TACR2P21452 398 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 KCNA5P22460 613 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 ETFBP38117 255 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 FLOT2Q14254 428 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 ALG1LQ6GMV1 187 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 ISCA2Q86U28 154 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 ANKRD49Q8WVL7 239 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 AUTS2Q8WXX7 1259 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 TMEM169Q96HH4 297 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 TBATAQ96M53 351 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 CYP4F12Q9HCS2 524 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 BACE2Q9Y5Z0 518 aa16.47■□□□□ 0.23
TMEM53-208ENST00000476724 F5H5T6 163 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 UBDO15205 165 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 CD3EAPO15446 510 aaKnown RBP16.46■□□□□ 0.23
TMEM53-208ENST00000476724 SMIM24O75264 130 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 GPC4O75487 556 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 RPP40O75818 363 aaKnown RBP16.46■□□□□ 0.23
TMEM53-208ENST00000476724 LYNP07948 512 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 SERPINF2P08697 491 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 ENO3P13929 434 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-208ENST00000476724 UQCRBP14927 111 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 OGNP20774 298 aaKnown RBP16.46■□□□□ 0.23
TMEM53-208ENST00000476724 FDXRP22570 491 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 THOP1P52888 689 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 CDKN2DP55273 166 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 MED21Q13503 144 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 TRIP10Q15642 601 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 LPCAT4Q643R3 524 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 PQLC1Q8N2U9 271 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 BTBD9Q96Q07 612 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 MAGEH1Q9H213 219 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 TRAF6Q9Y4K3 522 aa16.46■□□□□ 0.23
TMEM53-208ENST00000476724 SLC38A8A6NNN8 435 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 SKAP2O75563 359 aaPredicted RBP16.46■□□□□ 0.22
TMEM53-208ENST00000476724 CD1EP15812 388 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 EN2P19622 333 aaPredicted RBP16.46■□□□□ 0.22
TMEM53-208ENST00000476724 SUOXP51687 545 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 ZNF678Q5SXM1 525 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 GPR158Q5T848 1215 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 OGFRL1Q5TC84 451 aaPredicted RBP16.46■□□□□ 0.22
TMEM53-208ENST00000476724 CMTR2Q8IYT2 770 aaKnown RBP16.46■□□□□ 0.22
TMEM53-208ENST00000476724 PIP4K2CQ8TBX8 421 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 PHF21BQ96EK2 531 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 CEP295NLQ96MC4 621 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 GSTO2Q9H4Y5 243 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 PDFQ9HBH1 243 aa16.46■□□□□ 0.22
TMEM53-208ENST00000476724 MARCH4Q9P2E8 410 aaPredicted RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms