RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 HK3P52790 923 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 SKOR1P84550 965 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 DAB2P98082 770 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 ILKQ13418 452 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 KAZNQ674X7 775 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 PNCKQ6P2M8 343 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 CRTC1Q6UUV9 634 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 RFLNAQ6ZTI6 216 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 DAAM2Q86T65 1068 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 HID1Q8IV36 788 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 SPC24Q8NBT2 197 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 DTD2Q96FN9 168 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 TBATAQ96M53 351 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 WDR92Q96MX6 357 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 BAG1Q99933 345 aaPredicted RBP21.18■□□□□ 0.98
LIME1-204ENST00000476183 LGR4Q9BXB1 951 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 SLC13A1Q9BZW2 595 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 hCG_1818297A0A087WSY0 165 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 TMEM202A6NGA9 273 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 PSMD11O00231 422 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 PPP1R12AO14974 1030 aaPredicted RBP21.17■□□□□ 0.98
LIME1-204ENST00000476183 CAPNS1P04632 268 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 KIAA1024LP59773 190 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 SRP54P61011 504 aaKnown RBP21.17■□□□□ 0.98
LIME1-204ENST00000476183 TFDP2Q14188 446 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 TCEA2Q15560 299 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 LRRC66Q68CR7 880 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 Q6ZVL8 140 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 TECPR1Q7Z6L1 1165 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 TMPRSS12Q86WS5 348 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 OR1E3Q8WZA6 343 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 PDXPQ96GD0 296 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 PCDH9Q9HC56 1237 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 HAUS2Q9NVX0 235 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 SEPT10Q9P0V9 454 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 KLQ9UEF7 1012 aa21.17■□□□□ 0.98
LIME1-204ENST00000476183 BTNL10A8MVZ5 291 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 LMO7DNF2Z398 122 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 TPP1O14773 563 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 ZRANB2O95218 330 aaKnown RBP eCLIP21.16■□□□□ 0.98
LIME1-204ENST00000476183 IPO7O95373 1038 aaKnown RBP21.16■□□□□ 0.98
LIME1-204ENST00000476183 HOXC4P09017 264 aaPredicted RBP21.16■□□□□ 0.98
LIME1-204ENST00000476183 CDK4P11802 303 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 VAV2P52735 878 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 EPHB1P54762 984 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 PTSQ03393 145 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 CAMK2BQ13554 666 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 ARHGEF7Q14155 803 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 PRKD1Q15139 912 aaPredicted RBP21.16■□□□□ 0.98
LIME1-204ENST00000476183 TFDP3Q5H9I0 405 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 HES3Q5TGS1 186 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 ZCCHC8Q6NZY4 707 aaKnown RBP21.16■□□□□ 0.98
LIME1-204ENST00000476183 RD3Q7Z3Z2 195 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 RCOR2Q8IZ40 523 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 LPCAT1Q8NF37 534 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 AGAP3Q96P47 875 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 BRD8Q9H0E9 1235 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 WDR26Q9H7D7 661 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 FGF22Q9HCT0 170 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 MRPL40Q9NQ50 206 aaKnown RBP21.16■□□□□ 0.98
LIME1-204ENST00000476183 IMPACTQ9P2X3 320 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 APC2O95996 2303 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 MYLKQ15746 1914 aa21.16■□□□□ 0.98
LIME1-204ENST00000476183 ANKRD11Q6UB99 2663 aaPredicted RBP21.15■□□□□ 0.98
LIME1-204ENST00000476183 A0A0U1RQJ8 604 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 CAPN8A6NHC0 703 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 CACNB4O00305 520 aaPredicted RBP21.15■□□□□ 0.98
LIME1-204ENST00000476183 YY2O15391 372 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 PJA2O43164 708 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 RASGRP1O95267 797 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 TGM2P21980 687 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 NR2C2P49116 596 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 BLKP51451 505 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 INSM1Q01101 510 aaPredicted RBP21.15■□□□□ 0.98
LIME1-204ENST00000476183 NDUFAF2Q8N183 169 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 EXD1Q8NHP7 514 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 RBM15Q96T37 977 aaKnown RBP eCLIP21.15■□□□□ 0.98
LIME1-204ENST00000476183 BOCQ9BWV1 1114 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 CD84Q9UIB8 345 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 ZMIZ1Q9ULJ6 1067 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 DGKBQ9Y6T7 804 aa21.15■□□□□ 0.98
LIME1-204ENST00000476183 RP1P56715 2156 aa21.14■□□□□ 0.98
LIME1-204ENST00000476183 ACACAQ13085 2346 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 TMEM8BA6NDV4 472 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 CA4P22748 312 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 PTPN3P26045 913 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 CTNNA1P35221 906 aaKnown RBP21.14■□□□□ 0.97
LIME1-204ENST00000476183 NAP1L1P55209 391 aaKnown RBP21.14■□□□□ 0.97
LIME1-204ENST00000476183 RPL26P61254 145 aaKnown RBP21.14■□□□□ 0.97
LIME1-204ENST00000476183 QPCTQ16769 361 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 HEATR4Q86WZ0 1026 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 CCDC50Q8IVM0 306 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 FSTL5Q8N475 847 aaPredicted RBP21.14■□□□□ 0.97
LIME1-204ENST00000476183 LRRC57Q8N9N7 239 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 OR56A4Q8NGH8 313 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 ATL2Q8NHH9 583 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 ZCCHC14Q8WYQ9 949 aaKnown RBP21.14■□□□□ 0.97
LIME1-204ENST00000476183 HAUS1Q96CS2 278 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 IMP4Q96G21 291 aaKnown RBP21.14■□□□□ 0.97
LIME1-204ENST00000476183 RBM41Q96IZ5 413 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms