RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CCNJLQ8IV13 435 aa18.11■□□□□ 0.49
ATG4B-217ENST00000475693 TTC30BQ8N4P2 665 aa18.11■□□□□ 0.49
ATG4B-217ENST00000475693 PIP4K2CQ8TBX8 421 aa18.11■□□□□ 0.49
ATG4B-217ENST00000475693 NAT14Q8WUY8 206 aa18.11■□□□□ 0.49
ATG4B-217ENST00000475693 ARRDC3Q96B67 414 aa18.11■□□□□ 0.49
ATG4B-217ENST00000475693 TUBGCP5Q96RT8 1024 aa18.11■□□□□ 0.49
ATG4B-217ENST00000475693 EURLQ9NYK6 297 aa18.11■□□□□ 0.49
ATG4B-217ENST00000475693 MARCH4Q9P2E8 410 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-217ENST00000475693 STARD13Q9Y3M8 1113 aa18.11■□□□□ 0.49
ATG4B-217ENST00000475693 ZNF711Q9Y462 761 aa18.11■□□□□ 0.49
ATG4B-217ENST00000475693 RGS16O15492 202 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-217ENST00000475693 RASSF9O75901 435 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 CA5AP35218 305 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 GMPRP36959 345 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 GRIA4P48058 902 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 MPP1Q00013 466 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 CDKN3Q16667 212 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 ZNF789Q5FWF6 425 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 CRTC1Q6UUV9 634 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 PARS2Q7L3T8 475 aaKnown RBP18.1■□□□□ 0.49
ATG4B-217ENST00000475693 LRRC6Q86X45 466 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 IL17RCQ8NAC3 791 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 TXNDC5Q8NBS9 432 aaKnown RBP18.1■□□□□ 0.49
ATG4B-217ENST00000475693 ACVR1CQ8NER5 493 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 SLC44A1Q8WWI5 657 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 RANBP9Q96S59 729 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 GPR63Q9BZJ6 419 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 ZFATQ9P243 1243 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 B4GALT6Q9UBX8 382 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 FKBPLQ9UIM3 349 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 PPM1HQ9ULR3 514 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 MTF2Q9Y483 593 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-217ENST00000475693 CCDC162PA2VCL2 907 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 C16orf96A6NNT2 1141 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 SPAG6O75602 509 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 TSHRP16473 764 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 CA4P22748 312 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 HPDP32754 393 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-217ENST00000475693 ZNF140P52738 457 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-217ENST00000475693 MGAT5Q09328 741 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 UGP2Q16851 508 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 CCDC121Q6ZUS5 278 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 FAM3CQ92520 227 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 ZNF641Q96N77 438 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-217ENST00000475693 MYCBPQ99417 103 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-217ENST00000475693 DHRS4Q9BTZ2 278 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 TMEM109Q9BVC6 243 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 TRPV5Q9NQA5 729 aa18.1■□□□□ 0.49
ATG4B-217ENST00000475693 HMX2A2RU54 273 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 KLF8O95600 359 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-217ENST00000475693 GOT2P00505 430 aaKnown RBP18.09■□□□□ 0.49
ATG4B-217ENST00000475693 SRFP11831 508 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 COL9A1P20849 921 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 GABRB3P28472 473 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 TNFRSF4P43489 277 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 PSMD8P48556 350 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 VASPP50552 380 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-217ENST00000475693 MAGOHP61326 146 aaKnown RBP18.09■□□□□ 0.49
ATG4B-217ENST00000475693 ZP2Q05996 745 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 IFT88Q13099 833 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 SEMA3AQ14563 771 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 TAF1AQ15573 450 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-217ENST00000475693 KLHL38Q2WGJ6 581 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 ZNF805Q5CZA5 627 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 MROH9Q5TGP6 573 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 LRRC66Q68CR7 880 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 PLPP6Q8IY26 295 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 CDKN2AIPNLQ96HQ2 116 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 ROPN1BQ9BZX4 212 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-217ENST00000475693 ROPN1Q9HAT0 212 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-217ENST00000475693 PCDH12Q9NPG4 1184 aa18.09■□□□□ 0.49
ATG4B-217ENST00000475693 GOLGA8RI6L899 631 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 CHUKO15111 745 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 TCEA3O75764 348 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 HNRNPLP14866 589 aaKnown RBP eCLIP18.08■□□□□ 0.49
ATG4B-217ENST00000475693 GRSF1Q12849 480 aaKnown RBP eCLIP18.08■□□□□ 0.49
ATG4B-217ENST00000475693 LACTB2Q53H82 288 aaPredicted RBP18.08■□□□□ 0.49
ATG4B-217ENST00000475693 ADGRD1Q6QNK2 874 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 Q6ZS52 159 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 OR8D1Q8WZ84 308 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 SCRN2Q96FV2 425 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 MKRN2Q9H000 416 aaKnown RBP18.08■□□□□ 0.49
ATG4B-217ENST00000475693 ZFYVE1Q9HBF4 777 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 MRM3Q9HC36 420 aaKnown RBP18.08■□□□□ 0.49
ATG4B-217ENST00000475693 MAGEE1Q9HCI5 957 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 CD84Q9UIB8 345 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 PHTF1Q9UMS5 762 aa18.08■□□□□ 0.49
ATG4B-217ENST00000475693 CAPN8A6NHC0 703 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 C2orf81A6NN90 581 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 CRTAMO95727 393 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 INHBAP08476 426 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 GSTA2P09210 222 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 LPOP22079 712 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-217ENST00000475693 PRAMEP78395 509 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 PTSQ03393 145 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 ELAVL3Q14576 367 aaKnown RBP18.08■□□□□ 0.48
ATG4B-217ENST00000475693 ZNF470Q6ECI4 717 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 NUDT18Q6ZVK8 323 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 STRA8Q7Z7C7 330 aa18.08■□□□□ 0.48
ATG4B-217ENST00000475693 CROCCP2Q86T23 111 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms