RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 HLA-DQB2P05538 268 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 ALPIP09923 528 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 CA4P22748 312 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 FECHP22830 423 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 LHCGRP22888 699 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 ETV3P41162 512 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 CDKN2BP42772 138 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 RPIAP49247 311 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 EPHB1P54762 984 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 RPL26P61254 145 aaKnown RBP11.19□□□□□ -0.62
CKS1B-206ENST00000474215 DYNLT1P63172 113 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 IFI35P80217 286 aaPredicted RBP11.19□□□□□ -0.62
CKS1B-206ENST00000474215 AP1B1Q10567 949 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 TFDP2Q14188 446 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 NR0B2Q15466 257 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 TAZQ16635 292 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 CDKN3Q16667 212 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 LVRNQ6Q4G3 990 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 CRTC1Q6UUV9 634 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 MFSD7Q6UXD7 560 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 NPNTQ6UXI9 565 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 NYAP1Q6ZVC0 841 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 Q6ZVL8 140 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 TSPAN33Q86UF1 283 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 PROSER1Q86XN7 944 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 PELI3Q8N2H9 469 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 CNTD1Q8N815 330 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 OR56A4Q8NGH8 313 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 MDM1Q8TC05 714 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 OR1E3Q8WZA6 343 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 GLMNQ92990 594 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 DTD2Q96FN9 168 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 BOCQ9BWV1 1114 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 LGR4Q9BXB1 951 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 TDRD1Q9BXT4 1180 aaKnown RBP11.19□□□□□ -0.62
CKS1B-206ENST00000474215 BRD8Q9H0E9 1235 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 ABCG4Q9H172 646 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 WDR26Q9H7D7 661 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 DKK4Q9UBT3 224 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 RPL26L1Q9UNX3 145 aaKnown RBP11.19□□□□□ -0.62
CKS1B-206ENST00000474215 TFR2Q9UP52 801 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 DOLKQ9UPQ8 538 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 CLCA2Q9UQC9 943 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 CHKBQ9Y259 395 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 DGKBQ9Y6T7 804 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 PTPRBP23467 1997 aa11.19□□□□□ -0.62
CKS1B-206ENST00000474215 ARID1BQ8NFD5 2236 aaPredicted RBP11.19□□□□□ -0.62
CKS1B-206ENST00000474215 IGF2RP11717 2491 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 PLXNB3Q9ULL4 1909 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 A0A0U1RQS6 177 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 EME2A4GXA9 379 aaPredicted RBP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 SOWAHDA6NJG2 315 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 PPP1R12AO14974 1030 aaPredicted RBP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 PSTPIP1O43586 416 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 ZRANB2O95218 330 aaKnown RBP eCLIP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 IPO7O95373 1038 aaKnown RBP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 MT-CO3P00414 261 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 CELA2BP08218 269 aaPredicted RBP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 MMP2P08253 660 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 CD86P42081 329 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 NR2C2P49116 596 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 PTSQ03393 145 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 DPTQ07507 201 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 CYP4F3Q08477 520 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 LRRC66Q68CR7 880 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 KCTD16Q68DU8 428 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 SPOCD1Q6ZMY3 1216 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 BZW1Q7L1Q6 419 aaKnown RBP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 TECPR1Q7Z6L1 1165 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 GKN2Q86XP6 184 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 SLC35F3Q8IY50 421 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 KATNAL2Q8IYT4 538 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 RCOR2Q8IZ40 523 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 DCBLD1Q8N8Z6 715 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 IFI44Q8TCB0 444 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 CALR3Q96L12 384 aaKnown RBP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 OLFM3Q96PB7 478 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 SMIM14Q96QK8 99 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 RBM15Q96T37 977 aaKnown RBP eCLIP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 TEX101Q9BY14 249 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 GOLPH3Q9H4A6 298 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 PCDH9Q9HC56 1237 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 FGF22Q9HCT0 170 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 PHPT1Q9NRX4 125 aaPredicted RBP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 SAE1Q9UBE0 346 aaPredicted RBP11.18□□□□□ -0.62
CKS1B-206ENST00000474215 PADI4Q9UM07 663 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 ASPMQ8IZT6 3477 aa11.18□□□□□ -0.62
CKS1B-206ENST00000474215 CAPN8A6NHC0 703 aa11.17□□□□□ -0.62
CKS1B-206ENST00000474215 CST8O60676 142 aa11.17□□□□□ -0.62
CKS1B-206ENST00000474215 MYCLP1P12525 358 aaPredicted RBP11.17□□□□□ -0.62
CKS1B-206ENST00000474215 ZNF30P17039 623 aa11.17□□□□□ -0.62
CKS1B-206ENST00000474215 TEAD1P28347 426 aa11.17□□□□□ -0.62
CKS1B-206ENST00000474215 SKOR1P84550 965 aa11.17□□□□□ -0.62
CKS1B-206ENST00000474215 TCEA2Q15560 299 aa11.17□□□□□ -0.62
CKS1B-206ENST00000474215 TFDP3Q5H9I0 405 aa11.17□□□□□ -0.62
CKS1B-206ENST00000474215 CDCP2Q5VXM1 449 aa11.17□□□□□ -0.62
CKS1B-206ENST00000474215 C11orf63Q6NUN7 778 aa11.17□□□□□ -0.62
CKS1B-206ENST00000474215 GUSBP11Q6P575 273 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms