RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 RPL26P61254 145 aaKnown RBP18.95■□□□□ 0.62
PTCD3-210ENST00000473829 FOXC1Q12948 553 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 XRCC4Q13426 336 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 GALNT3Q14435 633 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 QPCTQ16769 361 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 CCDC181Q5TID7 509 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 KCTD16Q68DU8 428 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 Q6ZVL8 140 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 KDELC2Q7Z4H8 507 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 SLCO6A1Q86UG4 719 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 ZNF567Q8N184 647 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 PNPLA1Q8N8W4 532 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 HTR3CQ8WXA8 447 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 FUBP1Q96AE4 644 aaKnown RBP18.95■□□□□ 0.62
PTCD3-210ENST00000473829 CDC6Q99741 560 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 FTSJ1Q9UET6 329 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 RPL26L1Q9UNX3 145 aaKnown RBP18.95■□□□□ 0.62
PTCD3-210ENST00000473829 H7C0C1 242 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 PSMD11O00231 422 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 TRIM38O00635 465 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 TOR1BO14657 336 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 FFAR2O15552 330 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 JUNDP17535 347 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 NFKBIAP25963 317 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 ATP5OP48047 213 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 PTSQ03393 145 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 ARHGEF7Q14155 803 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 NFATC4Q14934 902 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 PCSK7Q16549 785 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 CDKN3Q16667 212 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 ESRP1Q6NXG1 681 aaKnown RBP18.94■□□□□ 0.62
PTCD3-210ENST00000473829 TECPR1Q7Z6L1 1165 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 ZNF548Q8NEK5 533 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-210ENST00000473829 LZTFL1Q9NQ48 299 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 UBP1Q9NZI7 540 aa18.94■□□□□ 0.62
PTCD3-210ENST00000473829 KLHL8Q9P2G9 620 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-210ENST00000473829 TCRBV7S2A1N4TA0A589 114 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 MTSS1O43312 755 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 SPINK2P20155 84 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 STC1P52823 247 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 EIF3EP60228 445 aaKnown RBP18.93■□□□□ 0.62
PTCD3-210ENST00000473829 HNRNPKP61978 463 aaKnown RBP eCLIP18.93■□□□□ 0.62
PTCD3-210ENST00000473829 KLF1Q13351 362 aaPredicted RBP18.93■□□□□ 0.62
PTCD3-210ENST00000473829 PTK2BQ14289 1009 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 SLC14A2Q15849 920 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 ALG11Q2TAA5 492 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 PNCKQ6P2M8 343 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 ZNF662Q6ZS27 426 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 PHACTR4Q8IZ21 702 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 NDUFAF2Q8N183 169 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 OXNAD1Q96HP4 312 aaPredicted RBP18.93■□□□□ 0.62
PTCD3-210ENST00000473829 CNDP2Q96KP4 475 aaKnown RBP18.93■□□□□ 0.62
PTCD3-210ENST00000473829 LYSMD1Q96S90 227 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 LGR4Q9BXB1 951 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 CD84Q9UIB8 345 aa18.93■□□□□ 0.62
PTCD3-210ENST00000473829 SCN8AQ9UQD0 1980 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 ANKRD66B4E2M5 251 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 TNFSF14O43557 240 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 SIGLEC6O43699 453 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 PMPCBO75439 489 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 TJP3O95049 919 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 CLDN7O95471 211 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 RBP3P10745 1247 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 TRIM23P36406 574 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 CETN2P41208 172 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 KIAA1024LP59773 190 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 DNAJC3Q13217 504 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 KDELC1Q6UW63 502 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 PID1Q7Z2X4 250 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 TSACCQ96A04 125 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-210ENST00000473829 PDXPQ96GD0 296 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 GORASP1Q9BQQ3 440 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 MLPHQ9BV36 600 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-210ENST00000473829 LRRC61Q9BV99 259 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 ABCG8Q9H221 673 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 APOBEC3BQ9UH17 382 aaKnown RBP18.92■□□□□ 0.62
PTCD3-210ENST00000473829 R3HDM2Q9Y2K5 976 aaKnown RBP18.92■□□□□ 0.62
PTCD3-210ENST00000473829 PPP2R2CQ9Y2T4 447 aa18.92■□□□□ 0.62
PTCD3-210ENST00000473829 TMEM202A6NGA9 273 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 H3BM21 787 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 ENC1O14682 589 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 SCAMP1O15126 338 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 HYAL3O43820 417 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-210ENST00000473829 GCATO75600 419 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 DKK1O94907 266 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 LDOC1O95751 146 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-210ENST00000473829 SOD1P00441 154 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 PIRTP0C851 137 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 ZNF30P17039 623 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 CDK18Q07002 472 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 C1orf61Q13536 156 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 PROX2Q3B8N5 592 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 ENPP7Q6UWV6 458 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 CDKL3Q8IVW4 592 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-210ENST00000473829 OR4C6Q8NH72 309 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 LMX1AQ8TE12 382 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 SCAMP4Q969E2 229 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 EID2BQ96D98 161 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 WDR92Q96MX6 357 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 FCRL5Q96RD9 977 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms