RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 LIG3P49916 1009 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 CYP4F2P78329 520 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 NRG1Q02297 640 aaPredicted RBP6.96□□□□□ -1.3
CKS1B-205ENST00000473344 TLE1Q04724 770 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 TYRO3Q06418 890 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 MTM1Q13496 603 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 GRM3Q14832 879 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 TBR1Q16650 682 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 MAN2A1Q16706 1144 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 UGP2Q16851 508 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 C15orf59Q2T9L4 293 aaPredicted RBP6.96□□□□□ -1.3
CKS1B-205ENST00000473344 WSCD2Q2TBF2 565 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 TMEM52BQ4KMG9 183 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 C14orf28Q4W4Y0 310 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 VWA3BQ502W6 1294 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 CERCAMQ5T4B2 595 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 NAA35Q5VZE5 725 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 TRNP1Q6NT89 227 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 BORAQ6PGQ7 559 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 STRADAQ7RTN6 431 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 BNIPLQ7Z465 357 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 PIM3Q86V86 326 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 NLRP14Q86W24 1093 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 ZFAND4Q86XD8 727 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 DNAAF5Q86Y56 855 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 LRRC8AQ8IWT6 810 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 IL22RA1Q8N6P7 574 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 GPR156Q8NFN8 814 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 OR56A4Q8NGH8 313 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 PRR7Q8TB68 274 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 HCAR2Q8TDS4 363 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 RXFP2Q8WXD0 754 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 JPH3Q8WXH2 748 aaPredicted RBP6.96□□□□□ -1.3
CKS1B-205ENST00000473344 PDXPQ96GD0 296 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 RBM15Q96T37 977 aaKnown RBP eCLIP6.96□□□□□ -1.3
CKS1B-205ENST00000473344 SEMA3CQ99985 751 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 NDST4Q9H3R1 872 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 SIX2Q9NPC8 291 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 MFHAS1Q9Y4C4 1052 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 DAAM1Q9Y4D1 1078 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.96□□□□□ -1.3
CKS1B-205ENST00000473344 FHOD1Q9Y613 1164 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 DGKBQ9Y6T7 804 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 KNTC1P50748 2209 aa6.96□□□□□ -1.3
CKS1B-205ENST00000473344 HECTD1Q9ULT8 2610 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 RHPN2P1A8MT19 583 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 C9orf172C9J069 976 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 FAM72CH0Y354 149 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 PDE2AO00408 941 aaPredicted RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 NUDT21O43809 227 aaKnown RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 CREB3O43889 395 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 CPNE6O95741 557 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 MMEP08473 750 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 KRT3P12035 628 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 SKILP12757 684 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 DESP17661 470 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 SERPINA4P29622 427 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 ALDH4A1P30038 563 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 PPM1FP49593 454 aaPredicted RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 ATP1A2P50993 1020 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 CORO7P57737 925 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 YBEYP58557 167 aaPredicted RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 NOMO3P69849 1222 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 ZFP36L1Q07352 338 aaKnown RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 AMZ1Q400G9 498 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 PARP15Q460N3 678 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 CCDC14Q49A88 953 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 DNAJC21Q5F1R6 531 aaKnown RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 EFHC2Q5JST6 749 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 COLEC12Q5KU26 742 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 ARTNQ5T4W7 220 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 FAM72AQ5TYM5 149 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 MANEALQ5VSG8 457 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 FAM72DQ6L9T8 149 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 SCYL2Q6P3W7 929 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 BRAT1Q6PJG6 821 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 SPRED1Q7Z699 444 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 SLFN11Q7Z7L1 901 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 PHLDB2Q86SQ0 1253 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 NOP9Q86U38 636 aaKnown RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 FAM72BQ86X60 149 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 ZNF677Q86XU0 584 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 DTX1Q86Y01 620 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 CCDC185Q8N715 623 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 RTL3Q8N8U3 475 aaKnown RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 MLKLQ8NB16 471 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 NETO2Q8NC67 525 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 GIMAP7Q8NHV1 300 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 FAM172AQ8WUF8 416 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 ZNF641Q96N77 438 aaPredicted RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 TUBGCP2Q9BSJ2 902 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 SUV39H2Q9H5I1 410 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 CATSPERBQ9H7T0 1116 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 RDH14Q9HBH5 336 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 PCDH12Q9NPG4 1184 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 MRPL40Q9NQ50 206 aaKnown RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 FOXJ2Q9P0K8 574 aa6.95□□□□□ -1.3
CKS1B-205ENST00000473344 UBA2Q9UBT2 640 aaPredicted RBP6.95□□□□□ -1.3
CKS1B-205ENST00000473344 CCDC151A5D8V7 595 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms