RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PSMD11O00231 422 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 FZD6O60353 706 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 LRP4O75096 1905 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 MYCLP1P12525 358 aaPredicted RBP15.3■□□□□ 0.04
VTI1A-203ENST00000472892 LHCGRP22888 699 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 CASP14P31944 242 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 MLLT3P42568 568 aaPredicted RBP15.3■□□□□ 0.04
VTI1A-203ENST00000472892 CCL7P80098 99 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 SKOR1P84550 965 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 GALNT2Q10471 571 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 DPYSL3Q14195 570 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 PAFAH1B3Q15102 231 aaKnown RBP15.3■□□□□ 0.04
VTI1A-203ENST00000472892 ATP13A4Q4VNC1 1196 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 ARMC12Q5T9G4 340 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 GPR155Q7Z3F1 870 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 HSD11B1LQ7Z5J1 315 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 TAF8Q7Z7C8 310 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 FAM46DQ8NEK8 389 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 ZNF564Q8TBZ8 553 aaPredicted RBP15.3■□□□□ 0.04
VTI1A-203ENST00000472892 PIH1D2Q8WWB5 315 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 NUS1Q96E22 293 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 DTD2Q96FN9 168 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 NAF1Q96HR8 494 aaKnown RBP15.3■□□□□ 0.04
VTI1A-203ENST00000472892 MCCC1Q96RQ3 725 aaPredicted RBP15.3■□□□□ 0.04
VTI1A-203ENST00000472892 DPH1Q9BZG8 443 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 CYP4F12Q9HCS2 524 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 APPL1Q9UKG1 709 aa15.3■□□□□ 0.04
VTI1A-203ENST00000472892 BPTFQ12830 3046 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 CCDC187A0A096LP49 1063 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 A0A1W2PQM1 296 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 PMS2P1A4D2B8 440 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 NPIPB15A6NHN6 443 aaPredicted RBP15.29■□□□□ 0.04
VTI1A-203ENST00000472892 CDRT15L2A8MXV6 281 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 TMX2-CTNND1H3BSU7 103 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 TK2O00142 265 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 NOBOXO60393 691 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 PROSCO94903 275 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 FUCA1P04066 466 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 CEACAM5P06731 702 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 PNLIPP16233 465 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 GLB1P16278 677 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 TEAD1P28347 426 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 ETV3P41162 512 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 GARSP41250 739 aaKnown RBP15.29■□□□□ 0.04
VTI1A-203ENST00000472892 SSR1P43307 286 aaKnown RBP15.29■□□□□ 0.04
VTI1A-203ENST00000472892 PTPRRQ15256 657 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 TSR1Q2NL82 804 aaKnown RBP15.29■□□□□ 0.04
VTI1A-203ENST00000472892 ANKRD20A8PQ5CZ79 823 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 NCBP2-AS2Q69YL0 99 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 TECPR1Q7Z6L1 1165 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 ARL14Q8N4G2 192 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 LSM14AQ8ND56 463 aaKnown RBP15.29■□□□□ 0.04
VTI1A-203ENST00000472892 CCL4L1Q8NHW4 92 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 KCNE4Q8WWG9 221 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 MAML1Q92585 1016 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 FATE1Q969F0 183 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 LIN37Q96GY3 246 aaPredicted RBP15.29■□□□□ 0.04
VTI1A-203ENST00000472892 GFM1Q96RP9 751 aaKnown RBP15.29■□□□□ 0.04
VTI1A-203ENST00000472892 SEMA3CQ99985 751 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 LRRN3Q9H3W5 708 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 NT5MQ9NPB1 228 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 PHPT1Q9NRX4 125 aaPredicted RBP15.29■□□□□ 0.04
VTI1A-203ENST00000472892 UVRAGQ9P2Y5 699 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.29■□□□□ 0.04
VTI1A-203ENST00000472892 PTPRQQ9UMZ3 2332 aa15.29■□□□□ 0.04
VTI1A-203ENST00000472892 TEX51A0A1B0GUA7 166 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 PRSS38A1L453 326 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 MATN3O15232 486 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 ATXN7O15265 892 aaPredicted RBP15.28■□□□□ 0.04
VTI1A-203ENST00000472892 MFSD11O43934 449 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 RPLP0P05388 317 aaKnown RBP15.28■□□□□ 0.04
VTI1A-203ENST00000472892 PDHA1P08559 390 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 CES1P23141 567 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 CCNCP24863 283 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 UCNP55089 124 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 CXADRP78310 365 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 DPTQ07507 201 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 EIF3IQ13347 325 aaKnown RBP15.28■□□□□ 0.04
VTI1A-203ENST00000472892 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.04
VTI1A-203ENST00000472892 IHHQ14623 411 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 PDK2Q15119 407 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 C14orf28Q4W4Y0 310 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 CERCAMQ5T4B2 595 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 BROXQ5VW32 411 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 DENND2CQ68D51 928 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 ALG1LQ6GMV1 187 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 Q6ZVL8 140 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 CLEC14AQ86T13 490 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 TSPAN33Q86UF1 283 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 HEATR4Q86WZ0 1026 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 CPNE8Q86YQ8 564 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 SFTPA2Q8IWL1 248 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 KCTD6Q8NC69 237 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 GPBAR1Q8TDU6 330 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 TSGA13Q96PP4 275 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 ZNF670Q9BS34 389 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 FRMD8Q9BZ67 464 aaPredicted RBP15.28■□□□□ 0.04
VTI1A-203ENST00000472892 XPO4Q9C0E2 1151 aaKnown RBP15.28■□□□□ 0.04
VTI1A-203ENST00000472892 POLR1EQ9GZS1 481 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms