RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	PRSS56	P0CW18	603 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GJA4	P35212	333 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PGGT1B	P53609	377 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	IRX4	P78413	519 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	LRIT3	Q3SXY7	679 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	FASTKD1	Q53R41	847 aa	Known RBP	10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ARSI	Q5FYB1	569 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	LRRC73	Q5JTD7	316 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	MRNIP	Q6NTE8	343 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	C16orf46	Q6P387	395 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	AFTPH	Q6ULP2	937 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GDPD4	Q6W3E5	623 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	KIAA0408	Q6ZU52	694 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CILP2	Q8IUL8	1156 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CCDC63	Q8NA47	563 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	BCAS4	Q8TDM0	211 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CHMP6	Q96FZ7	201 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	NDN	Q99608	321 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	TRMT61B	Q9BVS5	477 aa	Known RBP	10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CPEB1	Q9BZB8	566 aa	Known RBP	10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	FAM96A	Q9H5X1	160 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PLLP	Q9Y342	182 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PKP3	Q9Y446	797 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	COL4A3	Q01955	1670 aa		10.77	□□□□□ -0.69
MRPS18B-208	ENST00000472267	KIAA1549L	Q6ZVL6	1849 aa		10.77	□□□□□ -0.69
MRPS18B-208	ENST00000472267	BRWD1	Q9NSI6	2320 aa		10.77	□□□□□ -0.69
MRPS18B-208	ENST00000472267		A0A096LPK6	155 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CAPN8	A6NHC0	703 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267		H3BQ06	376 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	NDUFAB1	O14561	156 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	PHGDH	O43175	533 aa	Known RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	LEFTY1	O75610	366 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CLDN7	O95471	211 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	S1PR4	O95977	384 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	MPO	P05164	745 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	NEFH	P12036	1026 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	HLA-E	P13747	358 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	PML	P29590	882 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	MC4R	P32245	332 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	FOXN2	P32314	431 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CRHR1	P34998	444 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	HADHA	P40939	763 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	OPRD1	P41143	372 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	LEPR	P48357	1165 aa	Known RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	SLC12A2	P55011	1212 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	IRF9	Q00978	393 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	SEMA3A	Q14563	771 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	POM121L1P	Q3SYA9	428 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	ZRANB3	Q5FWF4	1079 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	RBM20	Q5T481	1227 aa	Known RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CPLX4	Q7Z7G2	160 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	LMNTD2	Q8IXW0	634 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	LRRC34	Q8IZ02	419 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CNPY4	Q8N129	248 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	ARMC2	Q8NEN0	867 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	SPOCK2	Q92563	424 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	VOPP1	Q96AW1	172 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	MAGEB18	Q96M61	343 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	ZNF641	Q96N77	438 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CCT8L2	Q96SF2	557 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CCDC134	Q9H6E4	229 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	ZFYVE1	Q9HBF4	777 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	MKS1	Q9NXB0	559 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	IL36A	Q9UHA7	158 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	DCDC2	Q9UHG0	476 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CD207	Q9UJ71	328 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	TLK1	Q9UKI8	766 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	PHTF1	Q9UMS5	762 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	COLQ	Q9Y215	455 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CRYL1	Q9Y2S2	319 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	USP15	Q9Y4E8	981 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	NUMBL	Q9Y6R0	609 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	TRIOBP	Q9H2D6	2365 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	BPTF	Q12830	3046 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	ERICH4	A6NGS2	130 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	NPIPB15	A6NHN6	443 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	GOLGA8CP	A6NN73	597 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	WASH3P	C4AMC7	463 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	GLRA3	O75311	464 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	ECI2	O75521	394 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	C2	P06681	752 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	MAGEA12	P43365	314 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CDKN1C	P49918	316 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	CLCN5	P51795	746 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	SF3A3	Q12874	501 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	ZNF460	Q14592	562 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	ZKSCAN8	Q15776	578 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	ITPRIPL2	Q3MIP1	535 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	TAF1B	Q53T94	588 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	USP45	Q70EL2	814 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	MTSS1L	Q765P7	747 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	TAS2R42	Q7RTR8	314 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	TSPAN33	Q86UF1	283 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	PLPP6	Q8IY26	295 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	TERB1	Q8NA31	727 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	SMRP1	Q8NCR6	262 aa		10.76	□□□□□ -0.69
MRPS18B-208	ENST00000472267	GPR150	Q8NGU9	434 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms