RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 RPLP0P05388 317 aaKnown RBP22.56■■□□□ 1.2
C9orf3-213ENST00000471978 CD48P09326 243 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 CYP2A6P11509 494 aaPredicted RBP22.56■■□□□ 1.2
C9orf3-213ENST00000471978 HADHQ16836 314 aaKnown RBP22.56■■□□□ 1.2
C9orf3-213ENST00000471978 LRRC49Q8IUZ0 686 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 ARL14Q8N4G2 192 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 DPH1Q9BZG8 443 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 NT5MQ9NPB1 228 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 KCTD5Q9NXV2 234 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 IFNKQ9P0W0 207 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 SHROOM3Q8TF72 1996 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 TEX51A0A1B0GUA7 166 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 KLK10O43240 276 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 PGLSO95336 258 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 MYCLP1P12525 358 aaPredicted RBP22.55■■□□□ 1.2
C9orf3-213ENST00000471978 ETV3P41162 512 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 UCNP55089 124 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 ARMC12Q5T9G4 340 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 OGFOD3Q6PK18 319 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 HSD11B1LQ7Z5J1 315 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 B3GNT8Q7Z7M8 397 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 CBARPQ8N350 705 aaPredicted RBP22.55■■□□□ 1.2
C9orf3-213ENST00000471978 ZNF564Q8TBZ8 553 aaPredicted RBP22.55■■□□□ 1.2
C9orf3-213ENST00000471978 FAM71BQ8TC56 605 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 DTD2Q96FN9 168 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 SCRN2Q96FV2 425 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 LRRN3Q9H3W5 708 aa22.55■■□□□ 1.2
C9orf3-213ENST00000471978 PHPT1Q9NRX4 125 aaPredicted RBP22.55■■□□□ 1.2
C9orf3-213ENST00000471978 A0A1W2PQM1 296 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 PRSS38A1L453 326 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 NPIPB15A6NHN6 443 aaPredicted RBP22.54■■□□□ 1.2
C9orf3-213ENST00000471978 D6RAR5 112 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 ATXN7O15265 892 aaPredicted RBP22.54■■□□□ 1.2
C9orf3-213ENST00000471978 TNFSF15O95150 251 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 GLB1P16278 677 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 LHCGRP22888 699 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 CASP14P31944 242 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 GJC1P36383 396 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 TMPRSS3P57727 454 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 ITKQ08881 620 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 PTPRRQ15256 657 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 TSR1Q2NL82 804 aaKnown RBP22.54■■□□□ 1.2
C9orf3-213ENST00000471978 HEATR4Q86WZ0 1026 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 TEX26Q8N6G2 289 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 Q8N9G6 341 aaPredicted RBP22.54■■□□□ 1.2
C9orf3-213ENST00000471978 CCL4L1Q8NHW4 92 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 SLC39A7Q92504 469 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 LIN37Q96GY3 246 aaPredicted RBP22.54■■□□□ 1.2
C9orf3-213ENST00000471978 TEX101Q9BY14 249 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 DPEP2Q9H4A9 486 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 EPB41L5Q9HCM4 733 aa22.54■■□□□ 1.2
C9orf3-213ENST00000471978 GOLGA6CA6NDK9 693 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 GOLGA6BA6NDN3 693 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 CDRT15L2A8MXV6 281 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 B4DGG1 531 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 TMX2-CTNND1H3BSU7 103 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 PSMD11O00231 422 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 MFSD11O43934 449 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 NOBOXO60393 691 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 GOLGA6DP0CG33 693 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 CTPS1P17812 591 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 GARSP41250 739 aaKnown RBP22.53■■□□□ 1.2
C9orf3-213ENST00000471978 MLLT3P42568 568 aaPredicted RBP22.53■■□□□ 1.2
C9orf3-213ENST00000471978 ARSEP51690 589 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 ARHGEF7Q14155 803 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 DPYSL3Q14195 570 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 KIF26BQ2KJY2 2108 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 ATP13A4Q4VNC1 1196 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 C14orf28Q4W4Y0 310 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 CERCAMQ5T4B2 595 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 SPECC1LQ69YQ0 1117 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 Q6ZVL8 140 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 USP45Q70EL2 814 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 TSPAN33Q86UF1 283 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 CCNJLQ8IV13 435 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 SFTPA2Q8IWL1 248 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 KCTD6Q8NC69 237 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 CCDC97Q96F63 343 aaPredicted RBP22.53■■□□□ 1.2
C9orf3-213ENST00000471978 MCCC1Q96RQ3 725 aaPredicted RBP22.53■■□□□ 1.2
C9orf3-213ENST00000471978 SEMA3CQ99985 751 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 FOXP3Q9BZS1 431 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 STRADBQ9C0K7 418 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 SUDS3Q9H7L9 328 aaPredicted RBP22.53■■□□□ 1.2
C9orf3-213ENST00000471978 CARS2Q9HA77 564 aaKnown RBP22.53■■□□□ 1.2
C9orf3-213ENST00000471978 CPNE5Q9HCH3 593 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 GOLGA6AQ9NYA3 693 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 CTTNBP2NLQ9P2B4 639 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 APPL1Q9UKG1 709 aa22.53■■□□□ 1.2
C9orf3-213ENST00000471978 CFAP46Q8IYW2 2715 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 TK2O00142 265 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 CEACAM5P06731 702 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 INHBCP55103 352 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 SKOR1P84550 965 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 GALNT2Q10471 571 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 PAFAH1B3Q15102 231 aaKnown RBP22.52■■□□□ 1.2
C9orf3-213ENST00000471978 NCBP2-AS2Q69YL0 99 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 CPNE8Q86YQ8 564 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 NDUFAF2Q8N183 169 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 FBXO39Q8N4B4 442 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 PIH1D2Q8WWB5 315 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms