RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 LGMNQ99538 433 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 BRD8Q9H0E9 1235 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 SEMA6CQ9H3T2 930 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 NT5MQ9NPB1 228 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 DTLQ9NZJ0 730 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 IFNKQ9P0W0 207 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 MOSPD1Q9UJG1 213 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 PRKAB1Q9Y478 270 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 SPTA1P02549 2419 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 UNC13CQ8NB66 2214 aa8.09□□□□□ -1.12
USP48-207ENST00000471752 SHROOM3Q8TF72 1996 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 MAST4O15021 2626 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 CDRT15L2A8MXV6 281 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 B4DGG1 531 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 RRP8O43159 456 aaKnown RBP8.08□□□□□ -1.12
USP48-207ENST00000471752 MFSD11O43934 449 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 DXOO77932 396 aaKnown RBP8.08□□□□□ -1.12
USP48-207ENST00000471752 HEXIM1O94992 359 aaKnown RBP8.08□□□□□ -1.12
USP48-207ENST00000471752 TNFP01375 233 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ELFN1P0C7U0 828 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 CCDC172P0C7W6 258 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 SERPINA4P29622 427 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 CASP14P31944 242 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 UGT1A5P35504 534 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ARSDP51689 593 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 CDH6P55285 790 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 UBASH3AP57075 661 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 B4GALNT1Q00973 533 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 DSC2Q02487 901 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 PTSQ03393 145 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 GBE1Q04446 702 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 CLN3Q13286 438 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 MTM1Q13496 603 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 DPYSL3Q14195 570 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 NFKBIBQ15653 356 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 BOLA3Q53S33 107 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 CCDC122Q5T0U0 273 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ZNF648Q5T619 568 aaPredicted RBP8.08□□□□□ -1.12
USP48-207ENST00000471752 TMCO4Q5TGY1 634 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 DOK6Q6PKX4 331 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ZFAND4Q86XD8 727 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ZNF761Q86XN6 746 aaPredicted RBP8.08□□□□□ -1.12
USP48-207ENST00000471752 ZNF843Q8N446 348 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ARL10Q8N8L6 244 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 OR56A4Q8NGH8 313 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ARRDC2Q8TBH0 407 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 FAM71BQ8TC56 605 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 RAPGEF5Q92565 580 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 EID2BQ96D98 161 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ZNF578Q96N58 590 aaPredicted RBP8.08□□□□□ -1.12
USP48-207ENST00000471752 NUDCD1Q96RS6 583 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 TUBGCP5Q96RT8 1024 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 WDR24Q96S15 920 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 NAT10Q9H0A0 1025 aaKnown RBP8.08□□□□□ -1.12
USP48-207ENST00000471752 ABCG8Q9H221 673 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 LRRN3Q9H3W5 708 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 RDH14Q9HBH5 336 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 USP29Q9HBJ7 922 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 EPB41L5Q9HCM4 733 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ARFGAP3Q9NP61 516 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 TMEM9Q9P0T7 183 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 SEPT3Q9UH03 358 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 ANAPC7Q9UJX3 599 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 CAPN11Q9UMQ6 739 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 DGKBQ9Y6T7 804 aa8.08□□□□□ -1.12
USP48-207ENST00000471752 TMEM110-MUSTN1A8MSY1 372 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 D6RAR5 112 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 GOLGA6L22H0YM25 854 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 H3BRJ5 948 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 ATXN7O15265 892 aaPredicted RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 PPM1DO15297 605 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 FZD6O60353 706 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 PGLSO95336 258 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 CLDN7O95471 211 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 CPP00450 1065 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 MMP2P08253 660 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 CCL4P13236 92 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 SLC5A2P31639 672 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 VIPR1P32241 457 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 HTR7P34969 479 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 SSR1P43307 286 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 MMP13P45452 471 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 GNPDA1P46926 289 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 SUOXP51687 545 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 PCBP4P57723 403 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 KIAA1024LP59773 190 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 AP1S1P61966 158 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 CYP4F2P78329 520 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 CTBSQ01459 385 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 SPIDRQ14159 915 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 HLTFQ14527 1009 aaKnown RBP eCLIP8.07□□□□□ -1.12
USP48-207ENST00000471752 C16orf72Q14CZ0 275 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 LLGL1Q15334 1064 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 ELOCQ15369 112 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 ASTE1Q2TB18 679 aaPredicted RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 AMZ1Q400G9 498 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 FILIP1LQ4L180 1135 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 TDRD12Q587J7 1177 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 ANKRD20A8PQ5CZ79 823 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 CERCAMQ5T4B2 595 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms