RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TSACCQ96A04 125 aaPredicted RBP5.9□□□□□ -1.46
VARS-222ENST00000470953 FUBP1Q96AE4 644 aaKnown RBP5.9□□□□□ -1.46
VARS-222ENST00000470953 KIAA1143Q96AT1 154 aaPredicted RBP5.9□□□□□ -1.46
VARS-222ENST00000470953 C18orf8Q96DM3 657 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 RTP4Q96DX8 246 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 BTN2A3PQ96KV6 586 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 FCRL2Q96LA5 508 aaPredicted RBP5.9□□□□□ -1.46
VARS-222ENST00000470953 RPRD1AQ96P16 312 aaPredicted RBP5.9□□□□□ -1.46
VARS-222ENST00000470953 HAPLN3Q96S86 360 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 DDA1Q9BW61 102 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 STK33Q9BYT3 514 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 SLC13A1Q9BZW2 595 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 ASNSD1Q9NWL6 643 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 SLC39A1Q9NY26 324 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.9□□□□□ -1.46
VARS-222ENST00000470953 TMEM9Q9P0T7 183 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 TMEM63CQ9P1W3 806 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 LRIT1Q9P2V4 623 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 XPO7Q9UIA9 1087 aaKnown RBP5.9□□□□□ -1.46
VARS-222ENST00000470953 NTNG1Q9Y2I2 539 aa5.9□□□□□ -1.46
VARS-222ENST00000470953 ZGRF1Q86YA3 2104 aa5.9□□□□□ -1.47
VARS-222ENST00000470953 MGAM2Q2M2H8 2515 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 A6NCN8 305 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 C1QTNF3-AMACRE9PGA6 284 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 K7ERQ8 282 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 M0QYT0 321 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 FPGTO14772 594 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 HGSO14964 777 aaPredicted RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 ATP9BO43861 1147 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 MAP3K6O95382 1288 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 IGLV3-27P01718 113 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 TPM3P06753 285 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 MMEP08473 750 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 PDGFRAP16234 1089 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 GLB1P16278 677 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 ZNF18P17022 549 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 TACR2P21452 398 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 MAP4P27816 1152 aaKnown RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 IGFALSP35858 605 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 NNMTP40261 264 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 STAT5AP42229 794 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 CDR2Q01850 454 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 SLC6A3Q01959 620 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 PPARDQ03181 441 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 DEUP1Q05D60 604 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 ABHD18Q0P651 414 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 DLG2Q15700 870 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 SYPL2Q5VXT5 272 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 NKAIN2Q5VXU1 208 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 CPZQ66K79 652 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 SMYD5Q6GMV2 418 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 OLFML1Q6UWY5 402 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 LRRC31Q6UY01 552 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 ERN2Q76MJ5 926 aaKnown RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 BEND5Q7L4P6 421 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 SLC26A9Q7LBE3 791 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 MRGPRGQ86SM5 289 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 TMEM110Q86TL2 294 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 NOP9Q86U38 636 aaKnown RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 PIM3Q86V86 326 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 NRSN1Q8IZ57 195 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 RBMXL3Q8N7X1 1067 aaKnown RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 BMPERQ8N8U9 685 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 ST6GALNAC3Q8NDV1 305 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 WFDC11Q8NEX6 87 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 EPS8L1Q8TE68 723 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 SLC20A1Q8WUM9 679 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 CPA5Q8WXQ8 436 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 PNPLA2Q96AD5 504 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 FEM1CQ96JP0 617 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 TBATAQ96M53 351 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 PPP1R9BQ96SB3 815 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 C11orf70Q9BRQ4 267 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 SLC25A23Q9BV35 468 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 SELENOOQ9BVL4 669 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 C1QTNF2Q9BXJ5 285 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 IRX2Q9BZI1 471 aaPredicted RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 EDEM3Q9BZQ6 932 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 SIK2Q9H0K1 926 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 GANQ9H2C0 597 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 APMAPQ9HDC9 416 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 MLXIPLQ9NP71 852 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 MRPL40Q9NQ50 206 aaKnown RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 MBNL1Q9NR56 388 aaKnown RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 METTL5Q9NRN9 209 aaKnown RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 LIMA1Q9UHB6 759 aaKnown RBP5.89□□□□□ -1.47
VARS-222ENST00000470953 SLC25A13Q9UJS0 675 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 DOLKQ9UPQ8 538 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 POLHQ9Y253 713 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 FADS3Q9Y5Q0 445 aa5.89□□□□□ -1.47
VARS-222ENST00000470953 EPPK1P58107 5090 aaKnown RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 CDC14CA4D256 554 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 TCAF2A6NFQ2 919 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 KCNU1A8MYU2 1149 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 ALOX15BO15296 676 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 LRCH4O75427 683 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 STK17BO94768 372 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 CPNE6O95741 557 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 MT-CO1P00395 513 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 CALB1P05937 261 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms