RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 OR13C4Q8NGS5 318 aa28.88■■■□□ 2.21
SOD1-203ENST00000470944 TOE1Q96GM8 510 aaKnown RBP28.88■■■□□ 2.21
SOD1-203ENST00000470944 SRPK1Q96SB4 655 aaKnown RBP28.88■■■□□ 2.21
SOD1-203ENST00000470944 EBNA1BP2Q99848 306 aaKnown RBP28.88■■■□□ 2.21
SOD1-203ENST00000470944 KIFC1Q9BW19 673 aa28.88■■■□□ 2.21
SOD1-203ENST00000470944 PLAC1Q9HBJ0 212 aa28.88■■■□□ 2.21
SOD1-203ENST00000470944 BPIFA1Q9NP55 256 aa28.88■■■□□ 2.21
SOD1-203ENST00000470944 SLC2A6Q9UGQ3 507 aa28.88■■■□□ 2.21
SOD1-203ENST00000470944 SOX13Q9UN79 622 aa28.88■■■□□ 2.21
SOD1-203ENST00000470944 IGHV1OR15-9A0A0B4J2B8 117 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 TSPAN6O43657 245 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 ZNF217O75362 1048 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 CRTAMO95727 393 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 ELFN1P0C7U0 828 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 GM2AP17900 193 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 HOXA6P31267 233 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 HMGCLP35914 325 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 CSTF1Q05048 431 aaKnown RBP28.87■■■□□ 2.21
SOD1-203ENST00000470944 SEL1L3Q68CR1 1132 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 STAMBPL1Q96FJ0 436 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 PHACTR1Q9C0D0 580 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 SAMD15Q9P1V8 674 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 COQ6Q9Y2Z9 468 aa28.87■■■□□ 2.21
SOD1-203ENST00000470944 C2orf81A6NN90 581 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 CCL22O00626 93 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 NMBRP28336 390 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 ZNF140P52738 457 aaPredicted RBP28.86■■■□□ 2.21
SOD1-203ENST00000470944 STC1P52823 247 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 MFSD3Q96ES6 412 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 C9orf72Q96LT7 481 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 WSB2Q9NYS7 404 aaPredicted RBP28.86■■■□□ 2.21
SOD1-203ENST00000470944 IL17CQ9P0M4 197 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 ZFR2Q9UPR6 939 aaKnown RBP28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3DA0A087WVF3 549 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3IA0A087WXS9 549 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3EA0A087X179 549 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3KA0A087X1G2 549 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3FA6NER0 549 aaPredicted RBP28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3LB9A6J9 549 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 EIF3HO15372 352 aaKnown RBP eCLIP28.86■■■□□ 2.21
SOD1-203ENST00000470944 SLC34A2O95436 690 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3HP0C7X1 549 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 C6P13671 934 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 ZNF30P17039 623 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 LPOP22079 712 aaPredicted RBP28.86■■■□□ 2.21
SOD1-203ENST00000470944 MAGEA4P43358 317 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 FNTBP49356 437 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 TMPRSS15P98073 1019 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 UBAP2Q5T6F2 1119 aaKnown RBP28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3GQ6DHY5 549 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3CQ6IPX1 549 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 TBC1D3Q8IZP1 549 aaPredicted RBP28.86■■■□□ 2.21
SOD1-203ENST00000470944 OR4K2Q8NGD2 314 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 CXorf40AQ8TE69 158 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 LRRC39Q96DD0 335 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 DNAJC1Q96KC8 554 aaKnown RBP28.86■■■□□ 2.21
SOD1-203ENST00000470944 SGK2Q9HBY8 427 aa28.86■■■□□ 2.21
SOD1-203ENST00000470944 H0Y858 1186 aa28.85■■■□□ 2.21
SOD1-203ENST00000470944 CD6P30203 668 aa28.85■■■□□ 2.21
SOD1-203ENST00000470944 ETV3P41162 512 aa28.85■■■□□ 2.21
SOD1-203ENST00000470944 PPP2CBP62714 309 aa28.85■■■□□ 2.21
SOD1-203ENST00000470944 PPP2CAP67775 309 aa28.85■■■□□ 2.21
SOD1-203ENST00000470944 TSTD2Q5T7W7 516 aa28.85■■■□□ 2.21
SOD1-203ENST00000470944 ESRP1Q6NXG1 681 aaKnown RBP28.85■■■□□ 2.21
SOD1-203ENST00000470944 OR13J1Q8NGT2 312 aa28.85■■■□□ 2.21
SOD1-203ENST00000470944 FCRL3Q96P31 734 aaPredicted RBP28.85■■■□□ 2.21
SOD1-203ENST00000470944 PREBQ9HCU5 417 aa28.85■■■□□ 2.21
SOD1-203ENST00000470944 IGLON5A6NGN9 336 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 GPR37L1O60883 481 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 RNGTTO60942 597 aaKnown RBP28.84■■■□□ 2.21
SOD1-203ENST00000470944 MCM3P25205 808 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 Q6ZVL8 140 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 TMEM135Q86UB9 458 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 PYROXD1Q8WU10 500 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 PTCD2Q8WV60 388 aaKnown RBP28.84■■■□□ 2.21
SOD1-203ENST00000470944 CFAP36Q96G28 342 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 MRM3Q9HC36 420 aaKnown RBP28.84■■■□□ 2.21
SOD1-203ENST00000470944 TREX1Q9NSU2 369 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 ZC3H7BQ9UGR2 993 aaKnown RBP28.84■■■□□ 2.21
SOD1-203ENST00000470944 RPS6KL1Q9Y6S9 549 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 WDFY4Q6ZS81 3184 aa28.84■■■□□ 2.21
SOD1-203ENST00000470944 A0A1W2PQU0 124 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 MAGEB16A2A368 324 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 SEMA4FO95754 770 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 PGAM1P18669 254 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 OXTRP30559 389 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 ARSDP51689 593 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 ACOX1Q15067 660 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 OR2T34Q8NGX1 318 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 AENQ8WTP8 325 aaKnown RBP28.83■■■□□ 2.21
SOD1-203ENST00000470944 COQ10AQ96MF6 247 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 KDM4CQ9H3R0 1056 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 CD84Q9UIB8 345 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 MBD1Q9UIS9 605 aaPredicted RBP28.83■■■□□ 2.21
SOD1-203ENST00000470944 FAM237BA0A1B0GVD1 139 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 STX7O15400 261 aaKnown RBP28.83■■■□□ 2.21
SOD1-203ENST00000470944 BPIP17213 487 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 ANKRD20A4Q4UJ75 823 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 TMEM259Q4ZIN3 620 aa28.83■■■□□ 2.21
SOD1-203ENST00000470944 UNC5AQ6ZN44 842 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms