RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ULBP3Q9BZM4 244 aa12□□□□□ -0.49
LSM2-209ENST00000470083 TWSG1Q9GZX9 223 aa12□□□□□ -0.49
LSM2-209ENST00000470083 RETREG1Q9H6L5 497 aa12□□□□□ -0.49
LSM2-209ENST00000470083 SUDS3Q9H7L9 328 aaPredicted RBP12□□□□□ -0.49
LSM2-209ENST00000470083 KCND3Q9UK17 655 aa12□□□□□ -0.49
LSM2-209ENST00000470083 ENTPD4Q9Y227 616 aa12□□□□□ -0.49
LSM2-209ENST00000470083 PCDHGA6Q9Y5G7 932 aa12□□□□□ -0.49
LSM2-209ENST00000470083 CCDC168Q8NDH2 2452 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 PIPSLA2A3N6 862 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 INSIG1O15503 277 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 BUB1O43683 1085 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 KDELR3O43731 214 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 RAMP2O60895 175 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 LRCH4O75427 683 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 KATNA1O75449 491 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 CREG1O75629 220 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 NEFLP07196 543 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 MYCLP1P12525 358 aaPredicted RBP11.99□□□□□ -0.49
LSM2-209ENST00000470083 PRCPP42785 496 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 SYKP43405 635 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 FASLGP48023 281 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 PMS1P54277 932 aaKnown RBP11.99□□□□□ -0.49
LSM2-209ENST00000470083 RHOAP61586 193 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 GRM3Q14832 879 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 PTPN20Q4JDL3 420 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 INO80DQ53TQ3 878 aaPredicted RBP11.99□□□□□ -0.49
LSM2-209ENST00000470083 ZRANB3Q5FWF4 1079 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 PNCKQ6P2M8 343 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 LYSMD3Q7Z3D4 306 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 ZDHHC17Q8IUH5 632 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 PASD1Q8IV76 773 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 TP53INP2Q8IXH6 220 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 Q8NA96 180 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 EHBP1Q8NDI1 1231 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 NCAPGQ9BPX3 1015 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 SUV39H2Q9H5I1 410 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 SYNCQ9H7C4 482 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 SIDT1Q9NXL6 827 aaKnown RBP11.99□□□□□ -0.49
LSM2-209ENST00000470083 DNAI1Q9UI46 699 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 RCOR1Q9UKL0 485 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 CFAP45Q9UL16 551 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 PHTF1Q9UMS5 762 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 ST14Q9Y5Y6 855 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 CHD5Q8TDI0 1954 aa11.99□□□□□ -0.49
LSM2-209ENST00000470083 FUCA1P04066 466 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 CEACAM5P06731 702 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 RHOQP17081 205 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 GNPDA1P46926 289 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 PPM1FP49593 454 aaPredicted RBP11.98□□□□□ -0.49
LSM2-209ENST00000470083 RNASE9P60153 205 aaKnown RBP11.98□□□□□ -0.49
LSM2-209ENST00000470083 CTBSQ01459 385 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 LRRC63Q05C16 580 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 RALGDSQ12967 914 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 CFAP58Q5T655 872 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 MANEALQ5VSG8 457 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 FOXD4L5Q5VV16 416 aaPredicted RBP11.98□□□□□ -0.49
LSM2-209ENST00000470083 JMJD6Q6NYC1 403 aaPredicted RBP11.98□□□□□ -0.49
LSM2-209ENST00000470083 SLC47A2Q86VL8 602 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 ZNF761Q86XN6 746 aaPredicted RBP11.98□□□□□ -0.49
LSM2-209ENST00000470083 PELI3Q8N2H9 469 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 FOXD4L4Q8WXT5 416 aaPredicted RBP11.98□□□□□ -0.49
LSM2-209ENST00000470083 ZNF641Q96N77 438 aaPredicted RBP11.98□□□□□ -0.49
LSM2-209ENST00000470083 SLC38A3Q99624 504 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 FRMD8Q9BZ67 464 aaPredicted RBP11.98□□□□□ -0.49
LSM2-209ENST00000470083 SLAMF7Q9NQ25 335 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 TMEM248Q9NWD8 314 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 MAP10Q9P2G4 905 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 SUFUQ9UMX1 484 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 PCDHGC3Q9UN70 934 aa11.98□□□□□ -0.49
LSM2-209ENST00000470083 ZNF106Q9H2Y7 1883 aaKnown RBP11.97□□□□□ -0.49
LSM2-209ENST00000470083 PCNX1Q96RV3 2341 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 ARHGAP10A1A4S6 786 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 A6NCN8 305 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 TEX33O43247 280 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 CBX6O95503 412 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 ELFN1P0C7U0 828 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 ZNF28P17035 718 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 GM2AP17900 193 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 ERCC5P28715 1186 aaPredicted RBP11.97□□□□□ -0.49
LSM2-209ENST00000470083 CASP14P31944 242 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 ADCY8P40145 1251 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 NDUFA8P51970 172 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 NRG1Q02297 640 aaPredicted RBP11.97□□□□□ -0.49
LSM2-209ENST00000470083 NR6A1Q15406 480 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 COBLL1Q53SF7 1204 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 RWDD4Q6NW29 188 aaKnown RBP11.97□□□□□ -0.49
LSM2-209ENST00000470083 LIPIQ6XZB0 460 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 ENOSF1Q7L5Y1 443 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 BNIPLQ7Z465 357 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 FAM131BQ86XD5 332 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 ZSWIM9Q86XI8 627 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 DNAAF5Q86Y56 855 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 NETO2Q8NC67 525 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 GALNT6Q8NCL4 622 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 THAP4Q8WY91 577 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 STAMBPL1Q96FJ0 436 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 EXOC2Q96KP1 924 aa11.97□□□□□ -0.49
LSM2-209ENST00000470083 UNKQ9C0B0 810 aaKnown RBP11.97□□□□□ -0.49
LSM2-209ENST00000470083 UBE2TQ9NPD8 197 aaPredicted RBP11.97□□□□□ -0.49
LSM2-209ENST00000470083 PHPT1Q9NRX4 125 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms