RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SLC5A2P31639 672 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 VIPR1P32241 457 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 ETV3P41162 512 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 TRAF2Q12933 501 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 ARHGEF7Q14155 803 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 PIGHQ14442 188 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-210ENST00000469897 HLTFQ14527 1009 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPSF4-210ENST00000469897 NFKBIBQ15653 356 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 C14orf28Q4W4Y0 310 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 HGSNATQ68CP4 663 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 SPECC1LQ69YQ0 1117 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 INO80CQ6PI98 192 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-210ENST00000469897 CCDC81Q6ZN84 652 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 Q6ZVL8 140 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 NRROSQ86YC3 692 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 JAMLQ86YT9 394 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 CCNJLQ8IV13 435 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 NSMCE1Q8WV22 266 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 NUS1Q96E22 293 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 SCRN2Q96FV2 425 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 TMEM74Q96NL1 305 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 TEX101Q9BY14 249 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 CARS2Q9HA77 564 aaKnown RBP13.29□□□□□ -0.28
CPSF4-210ENST00000469897 PCDH18Q9HCL0 1135 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 DOCK4Q8N1I0 1966 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 PRSS38A1L453 326 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 D6RAR5 112 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 SOCS5O75159 536 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 FGF1P05230 155 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 PNLIPP16233 465 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 CTPS1P17812 591 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 LHCGRP22888 699 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 HSPA9P38646 679 aaKnown RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 MLLT3P42568 568 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 SSR1P43307 286 aaKnown RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 MMP13P45452 471 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 POLD2P49005 469 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 B4GALNT1Q00973 533 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 ZFP36L1Q07352 338 aaKnown RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 ITKQ08881 620 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 EIF3IQ13347 325 aaKnown RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 LY6DQ14210 128 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 TGIF1Q15583 401 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 ATP13A4Q4VNC1 1196 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 TDRD12Q587J7 1177 aaKnown RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 FIGNQ5HY92 759 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 CERCAMQ5T4B2 595 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 KIAA1614Q5VZ46 1190 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 TMPRSS9Q7Z410 1059 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 BBS5Q8N3I7 341 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 PTCD2Q8WV60 388 aaKnown RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 SMIM14Q96QK8 99 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 MGME1Q9BQP7 344 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 PISDQ9UG56 409 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 IP6K2Q9UHH9 426 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 BZW2Q9Y6E2 419 aaKnown RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 TP53BP1Q12888 1972 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-210ENST00000469897 TRPM6Q9BX84 2022 aa13.28□□□□□ -0.28
CPSF4-210ENST00000469897 A0A087X0T9 212 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 GOLGA6CA6NDK9 693 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 GOLGA6BA6NDN3 693 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 NPIPB15A6NHN6 443 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 NUDT21O43809 227 aaKnown RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 PGLSO95336 258 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 PDHA1P08559 390 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 CD48P09326 243 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 JMJD7P0C870 316 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 FAM228BP0C875 321 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 GOLGA6DP0CG33 693 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 CYP2A6P11509 494 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 MYCLP1P12525 358 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 CCNB1P14635 433 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 ITIH1P19827 911 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 AK4P27144 223 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 ALDH4A1P30038 563 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 CCKBRP32239 447 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 GNPDA1P46926 289 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 CDH6P55285 790 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 MAZP56270 477 aaKnown RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 OR1D5P58170 312 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 FANCCQ00597 558 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 SLC25A11Q02978 314 aaKnown RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 KRT81Q14533 505 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 TSR1Q2NL82 804 aaKnown RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 AMZ1Q400G9 498 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 ARMC12Q5T9G4 340 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 RFLNAQ6ZTI6 216 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 USP53Q70EK8 1073 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 SPRED1Q7Z699 444 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 TECPR1Q7Z6L1 1165 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 TSPAN33Q86UF1 283 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 HEATR4Q86WZ0 1026 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 ATPAF2Q8N5M1 289 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 GPBAR1Q8TDU6 330 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 TEKT4Q8WW24 435 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms