RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 STK35Q8TDR2 534 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 OR1E3Q8WZA6 343 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 PDXPQ96GD0 296 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 SLC45A3Q96JT2 553 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 CCDC74BQ96LY2 380 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 TAAR9Q96RI9 348 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 HEPHQ9BQS7 1158 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 SPON2Q9BUD6 331 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 WRAP53Q9BUR4 548 aaKnown RBP5.33□□□□□ -1.56
PTPN4-209ENST00000469511 TRIM55Q9BYV6 548 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 MAGEB5Q9BZ81 275 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 TM6SF2Q9BZW4 377 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 TMEM168Q9H0V1 697 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 CDH19Q9H159 772 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 ZDHHC6Q9H6R6 413 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 DYRK4Q9NR20 520 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 ST7Q9NRC1 585 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 SPATS2LQ9NUQ6 558 aaKnown RBP5.33□□□□□ -1.56
PTPN4-209ENST00000469511 APPL1Q9UKG1 709 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 PILRAQ9UKJ1 303 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 TRAF3IP3Q9Y228 551 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 TBC1D30Q9Y2I9 924 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 FRMD4BQ9Y2L6 1034 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 OR1A2Q9Y585 309 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 ST14Q9Y5Y6 855 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 PKDREJQ9NTG1 2253 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 MYO7BQ6PIF6 2116 aa5.33□□□□□ -1.56
PTPN4-209ENST00000469511 PIKFYVEQ9Y2I7 2098 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 NF1P21359 2839 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 TMEM202A6NGA9 273 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 EFCAB7A8K855 629 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 E5RJQ4 531 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 GNB5O14775 395 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 AREL1O15033 823 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 MAPK13O15264 365 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 TSPAN6O43657 245 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 AP1G1O43747 822 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 EIF5BO60841 1220 aaKnown RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 VPS4BO75351 444 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ADCY5O95622 1261 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 LDLRP01130 860 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 FUCA1P04066 466 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 RHOCP08134 193 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 GLB1P16278 677 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 CD82P27701 267 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 CD1CP29017 333 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ALDH4A1P30038 563 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 MXI1P50539 228 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 SRP54P61011 504 aaKnown RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 YPEL5P62699 121 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 SNRPNP63162 240 aaKnown RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ADAM9Q13443 819 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 INPP5AQ14642 412 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ELOCQ15369 112 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 FOXD4L6Q3SYB3 417 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 C5orf22Q49AR2 442 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 MAP9Q49MG5 647 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ZCWPW2Q504Y3 356 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 CARD16Q5EG05 197 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 RABGAP1LQ5R372 815 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ANKRD40Q6AI12 368 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 LVRNQ6Q4G3 990 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 FOXD4L3Q6VB84 417 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ASB18Q6ZVZ8 466 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 INTS8Q75QN2 995 aaKnown RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 TAF8Q7Z7C8 310 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ZNF761Q86XN6 746 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 NRROSQ86YC3 692 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ARHGEF19Q8IW93 802 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 FSTL5Q8N475 847 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 BMPERQ8N8U9 685 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 DENND6BQ8NEG7 585 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 FAM46DQ8NEK8 389 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 GOLGA5Q8TBA6 731 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 CPT1CQ8TCG5 803 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 APOBEC4Q8WW27 367 aaKnown RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ASB12Q8WXK4 309 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 STARD8Q92502 1023 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 RTP4Q96DX8 246 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 TRIM11Q96F44 468 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 PAGE5Q96GU1 130 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 HSFY1Q96LI6 401 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 SPATA32Q96LK8 384 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 TBATAQ96M53 351 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 KLHL32Q96NJ5 620 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 RBM15Q96T37 977 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 APOOQ9BUR5 198 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 LGR4Q9BXB1 951 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 UNKQ9C0B0 810 aaKnown RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 LRRC27Q9C0I9 530 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 CUEDC2Q9H467 287 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 SUDS3Q9H7L9 328 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 GPN2Q9H9Y4 310 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 FGF22Q9HCT0 170 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 PRDM8Q9NQV8 689 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 SLC39A1Q9NY26 324 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 HECAQ9UBI9 543 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 ZNF212Q9UDV6 495 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 TLK1Q9UKI8 766 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms