RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 LMLNQ96KR4 655 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 TTC1Q99614 292 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 OMDQ99983 421 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 MRPL57Q9BQC6 102 aaKnown RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 C1QTNF1Q9BXJ1 281 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 CPEB1Q9BZB8 566 aaKnown RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 GPR63Q9BZJ6 419 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 WWP1Q9H0M0 922 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 MRPL46Q9H2W6 279 aaKnown RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 GPAMQ9HCL2 828 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 TXLNGQ9NUQ3 528 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 OBP2AQ9NY56 170 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 KCNK4Q9NYG8 393 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 EVLQ9UI08 416 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 KCTD3Q9Y597 815 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 PCDHB9Q9Y5E1 797 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 A0A0G2JND7 137 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 A0A0J9YYE9 177 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 CCDC189A1A4V9 331 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 GRXCR1A8MXD5 290 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 F8W8V4 182 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 NRG2O14511 850 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 PER2O15055 1255 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 HOXC11O43248 304 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 HNRNPCL1O60812 293 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 TRIM13O60858 407 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 NDUFS3O75489 264 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 ATP5HO75947 161 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 FSBPO95073 299 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 NFATC1O95644 943 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 TRBC1P01850 177 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 SLC4A1P02730 911 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 PYGLP06737 847 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 PDHA1P08559 390 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 RBP1P09455 135 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 POLR2EP19388 210 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 MC4RP32245 332 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 HMGCLP35914 325 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 SERPINB5P36952 375 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 SKIV2L2P42285 1042 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 NRIP1P48552 1158 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 SLC1A6P48664 564 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 VASPP50552 380 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 TAS2R39P59534 338 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 NTHL1P78549 312 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 ECT2LQ008S8 904 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 CACNG1Q06432 222 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 OVGP1Q12889 678 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 PDAP1Q13442 181 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 LY6G5CQ5SRR4 150 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 RBM20Q5T481 1227 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 LYPLAL1Q5VWZ2 237 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 ZDHHC20Q5W0Z9 365 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 FAM109BQ6ICB4 259 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 CERS6Q6ZMG9 384 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 USP45Q70EL2 814 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 Q7L0L9 218 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 SPRED2Q7Z698 418 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 KIAA0907Q7Z7F0 614 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 ADGRD2Q7Z7M1 963 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 RBM23Q86U06 439 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 TMEM25Q86YD3 366 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 C10orf107Q8IVU9 208 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 CEP97Q8IW35 865 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 PLPP6Q8IY26 295 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 CENPLQ8N0S6 344 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 PLD6Q8N2A8 252 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 DEFB123Q8N688 67 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 PIWIL2Q8TC59 973 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 OSCP1Q8WVF1 389 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 RMDN2Q96LZ7 410 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 ZNF641Q96N77 438 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 LRRC37BQ96QE4 947 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 AARSD1Q9BTE6 412 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 TMEM120AQ9BXJ8 343 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 SYTL2Q9HCH5 934 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 ABCF3Q9NUQ8 709 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 OXSMQ9NWU1 459 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 MARCH4Q9P2E8 410 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 XPR1Q9UBH6 696 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 APPL1Q9UKG1 709 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 INTS6Q9UL03 887 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 SLC12A4Q9UP95 1085 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 YBX2Q9Y2T7 364 aaKnown RBP9.34□□□□□ -0.91
SMC1A-205ENST00000469129 VWA7Q9Y334 891 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 WNT6Q9Y6F9 365 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 SLC30A1Q9Y6M5 507 aa9.34□□□□□ -0.91
SMC1A-205ENST00000469129 UBA6A0AVT1 1052 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 OR51F1A6NGY5 319 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 WASH3PC4AMC7 463 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 G3V2L1 256 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 K7ERQ8 282 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 TK2O00142 265 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 CCL22O00626 93 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 TRAFD1O14545 582 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 SMAD6O43541 496 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 BUD23O43709 281 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 VPS26AO75436 327 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms