RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PARM1Q6UWI2 310 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 GLDNQ6ZMI3 551 aaPredicted RBP5.22□□□□□ -1.57
LSM5-209ENST00000468872 CLEC17AQ6ZS10 378 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 MEPCEQ7L2J0 689 aaKnown RBP5.22□□□□□ -1.57
LSM5-209ENST00000468872 SFTPA2Q8IWL1 248 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 MB21D2Q8IYB1 491 aaPredicted RBP5.22□□□□□ -1.57
LSM5-209ENST00000468872 ZBTB2Q8N680 514 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 TMEM163Q8TC26 289 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 SNRNP27Q8WVK2 155 aaKnown RBP5.22□□□□□ -1.57
LSM5-209ENST00000468872 PPP1R13BQ96KQ4 1090 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 SLITRK1Q96PX8 696 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 FZD3Q9NPG1 666 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 SIRT3Q9NTG7 399 aaPredicted RBP5.22□□□□□ -1.57
LSM5-209ENST00000468872 MTMR6Q9Y217 621 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 NFE2L3Q9Y4A8 694 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 TTLL3Q9Y4R7 772 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 A0A1W2PQ09 198 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 B4DLN1 442 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 I6L893 689 aaPredicted RBP5.21□□□□□ -1.58
LSM5-209ENST00000468872 SCAMP1O15126 338 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 HCRTR2O43614 444 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 LDB2O43679 373 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 ZC3H11AO75152 810 aaKnown RBP eCLIP5.21□□□□□ -1.58
LSM5-209ENST00000468872 SLC25A12O75746 678 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 STARD3NLO95772 234 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 RB1P06400 928 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 ZNF182P17025 639 aaPredicted RBP5.21□□□□□ -1.58
LSM5-209ENST00000468872 MYF6P23409 242 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 THPOP40225 353 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 ALDH7A1P49419 539 aaKnown RBP5.21□□□□□ -1.58
LSM5-209ENST00000468872 RASSF2P50749 326 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 P2RX3P56373 397 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 PSMC6P62333 389 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 SORDQ00796 357 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 C2orf68Q2NKX9 166 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 ZNF284Q2VY69 593 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 USP41Q3LFD5 358 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 RAB41Q5JT25 222 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 WASHC2DQ5SRD0 308 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 PLEKHS1Q5SXH7 462 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 C6orf141Q5SZD1 244 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 CFAP58Q5T655 872 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 JADE1Q6IE81 842 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 LINGO2Q7L985 606 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 TICAM2Q86XR7 235 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 TICAM1Q8IUC6 712 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 CCDC13Q8IYE1 715 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 LSMEM1Q8N8F7 131 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 BEST2Q8NFU1 509 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 GABPB2Q8TAK5 448 aaPredicted RBP5.21□□□□□ -1.58
LSM5-209ENST00000468872 ERGIC1Q969X5 290 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 PGAM5Q96HS1 289 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 SLC41A2Q96JW4 573 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 APOLD1Q96LR9 279 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 CAMK1GQ96NX5 476 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 GFM1Q96RP9 751 aaKnown RBP5.21□□□□□ -1.58
LSM5-209ENST00000468872 FAM110AQ9BQ89 295 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 NKIRAS2Q9NYR9 191 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 CISD1Q9NZ45 108 aaKnown RBP5.21□□□□□ -1.58
LSM5-209ENST00000468872 TMEM5Q9Y2B1 443 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 LRP12Q9Y561 859 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 SNX8Q9Y5X2 465 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 SESN1Q9Y6P5 492 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 NESP48681 1621 aa5.21□□□□□ -1.58
LSM5-209ENST00000468872 IGLV5-39A0A0G2JS06 123 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 NDUFS3O75489 264 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 GNLYP22749 145 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 GCH1P30793 250 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 NAE1Q13564 534 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 BECN1Q14457 450 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 CDONQ4KMG0 1287 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 MANEAQ5SRI9 462 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 KIAA1161Q6NSJ0 714 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 ANKRD54Q6NXT1 300 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 TRAPPC11Q7Z392 1133 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 CTU1Q7Z7A3 348 aaKnown RBP5.2□□□□□ -1.58
LSM5-209ENST00000468872 PATL1Q86TB9 770 aaKnown RBP5.2□□□□□ -1.58
LSM5-209ENST00000468872 WDR63Q8IWG1 891 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 TAGAPQ8N103 731 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 ARRDC2Q8TBH0 407 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 OTULINQ96BN8 352 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 ELMOD3Q96FG2 381 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 FEM1CQ96JP0 617 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 LYZL4Q96KX0 146 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 TMEM68Q96MH6 324 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 NLRP4Q96MN2 994 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 TMEM47Q9BQJ4 181 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 SRSF8Q9BRL6 282 aaKnown RBP5.2□□□□□ -1.58
LSM5-209ENST00000468872 MAK16Q9BXY0 300 aaKnown RBP5.2□□□□□ -1.58
LSM5-209ENST00000468872 ISCUQ9H1K1 167 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 SETD4Q9NVD3 440 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 SUCLA2Q9P2R7 463 aaPredicted RBP5.2□□□□□ -1.58
LSM5-209ENST00000468872 FBXL17Q9UF56 701 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 RPS6KA6Q9UK32 745 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 NACADO15069 1562 aa5.2□□□□□ -1.58
LSM5-209ENST00000468872 TMEM202A6NGA9 273 aa5.19□□□□□ -1.58
LSM5-209ENST00000468872 CDRT15L2A8MXV6 281 aa5.19□□□□□ -1.58
LSM5-209ENST00000468872 BEST1O76090 585 aa5.19□□□□□ -1.58
LSM5-209ENST00000468872 MTA2O94776 668 aa5.19□□□□□ -1.58
LSM5-209ENST00000468872 CHATP28329 748 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms