RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 ARL5AQ9Y689 179 aa10.2□□□□□ -0.78
MSH5-213ENST00000468136 HELZP42694 1942 aaKnown RBP10.19□□□□□ -0.78
MSH5-213ENST00000468136 A0A0J9YYE9 177 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 CAPN8A6NHC0 703 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 GOLGA8TH3BQL2 631 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 TRBC1P01850 177 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 ESR1P03372 595 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 DLDP09622 509 aaKnown RBP10.19□□□□□ -0.78
MSH5-213ENST00000468136 SRCP12931 536 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 TYRP14679 529 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 GJA1P17302 382 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 FDXRP22570 491 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 HLA-FP30511 346 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 CD70P32970 193 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 PTGER3P43115 390 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 MAGEA9P43362 315 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 ARSDP51689 593 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 ACTN3Q08043 901 aaPredicted RBP10.19□□□□□ -0.78
MSH5-213ENST00000468136 BNIP1Q12981 228 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 PRKAA1Q13131 559 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 EIF4HQ15056 248 aaKnown RBP10.19□□□□□ -0.78
MSH5-213ENST00000468136 PDGFRLQ15198 375 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 MYLK3Q32MK0 819 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 CARD16Q5EG05 197 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 PPM1JQ5JR12 505 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 GRAMD4Q6IC98 578 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 LRRC8EQ6NSJ5 796 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 C22orf39Q6P5X5 142 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 BRAT1Q6PJG6 821 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 CNSTQ6PJW8 725 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 LINGO4Q6UY18 593 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 TMEM184AQ6ZMB5 413 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 ADGRG2Q8IZP9 1017 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 NKAPQ8N5F7 415 aaKnown RBP10.19□□□□□ -0.78
MSH5-213ENST00000468136 VN1R2Q8NFZ6 395 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 OR4K2Q8NGD2 314 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 RHEBL1Q8TAI7 183 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 WFDC5Q8TCV5 224 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 OSCP1Q8WVF1 389 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 ECHDC3Q96DC8 303 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 TCEAL4Q96EI5 215 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 ATXN7L3BQ96GX2 97 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 SCYL1Q96KG9 808 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 AARSD1Q9BTE6 412 aaKnown RBP10.19□□□□□ -0.78
MSH5-213ENST00000468136 SUV39H2Q9H5I1 410 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 ZFYVE1Q9HBF4 777 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 GPAMQ9HCL2 828 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 NPHS2Q9NP85 383 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 FBXO6Q9NRD1 293 aaPredicted RBP10.19□□□□□ -0.78
MSH5-213ENST00000468136 NCKIPSDQ9NZQ3 722 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 IL17CQ9P0M4 197 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 KLHL42Q9P2K6 505 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 VTI1BQ9UEU0 232 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 HAO1Q9UJM8 370 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 ZNF711Q9Y462 761 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 PCDHB9Q9Y5E1 797 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 SLC30A1Q9Y6M5 507 aa10.19□□□□□ -0.78
MSH5-213ENST00000468136 GOLGA8QA0A0J9YX86 632 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 CCDC78A2IDD5 438 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 RGSL1A5PLK6 1076 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 GOLGA8OA6NCC3 632 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 TARM1B6A8C7 271 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 NEDD8-MDP1E9PL57 170 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 GOLGA8NF8WBI6 632 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 G3V2L1 256 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 VPS26AO75436 327 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 WISP3O95389 354 aaPredicted RBP10.18□□□□□ -0.78
MSH5-213ENST00000468136 PRKCGP05129 697 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 CYP2A6P11509 494 aaPredicted RBP10.18□□□□□ -0.78
MSH5-213ENST00000468136 ALOX15P16050 662 aaPredicted RBP10.18□□□□□ -0.78
MSH5-213ENST00000468136 ZNF30P17039 623 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 ZNF7P17097 686 aaPredicted RBP10.18□□□□□ -0.78
MSH5-213ENST00000468136 ITGALP20701 1170 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 RPS3P23396 243 aaKnown RBP eCLIP10.18□□□□□ -0.78
MSH5-213ENST00000468136 SCTRP47872 440 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 NFKB2Q00653 900 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 ZBTB16Q05516 673 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 KRT72Q14CN4 511 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 SLC5A9Q2M3M2 681 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 METTL21CQ5VZV1 264 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 C16orf46Q6P387 395 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 TPRG1Q6ZUI0 275 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 SNX20Q7Z614 316 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 TMEM25Q86YD3 366 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 C10orf107Q8IVU9 208 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 CENPLQ8N0S6 344 aaPredicted RBP10.18□□□□□ -0.78
MSH5-213ENST00000468136 FSTL5Q8N475 847 aaPredicted RBP10.18□□□□□ -0.78
MSH5-213ENST00000468136 PAF1Q8N7H5 531 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 MDGA1Q8NFP4 955 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 BPIFB1Q8TDL5 484 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 KCNJ9Q92806 393 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 SMARCD2Q92925 531 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 ULK4Q96C45 1275 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 SCRN2Q96FV2 425 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 CNDP1Q96KN2 507 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 EXOC2Q96KP1 924 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 GPR78Q96P69 363 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 DRC3Q9H069 523 aa10.18□□□□□ -0.78
MSH5-213ENST00000468136 ILKAPQ9H0C8 392 aaPredicted RBP10.18□□□□□ -0.78
MSH5-213ENST00000468136 TFB2MQ9H5Q4 396 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms