RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 Q6ZVL8 140 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 NLRP8Q86W28 1048 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 RAVER1Q8IY67 606 aaKnown RBP13.63□□□□□ -0.23
SSBP1-206ENST00000467681 RTP4Q96DX8 246 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 MRGPRX2Q96LB1 330 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
SSBP1-206ENST00000467681 GORASP1Q9BQQ3 440 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 MAGEE1Q9HCI5 957 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 GPR27Q9NS67 375 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 HOMER3Q9NSC5 361 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 DLL3Q9NYJ7 618 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 CDV3Q9UKY7 258 aaKnown RBP13.63□□□□□ -0.23
SSBP1-206ENST00000467681 ZNF148Q9UQR1 794 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 FNDC3AQ9Y2H6 1198 aaKnown RBP13.63□□□□□ -0.23
SSBP1-206ENST00000467681 AAR2Q9Y312 384 aaKnown RBP13.63□□□□□ -0.23
SSBP1-206ENST00000467681 DMDP11532 3685 aa13.63□□□□□ -0.23
SSBP1-206ENST00000467681 PCDH15Q96QU1 1955 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 GOLGA8CPA6NN73 597 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 F5H423 210 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-206ENST00000467681 CLDN7O95471 211 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 AGTP01019 485 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 ITGAVP06756 1048 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 ATXN1LP0C7T5 689 aaKnown RBP13.62□□□□□ -0.23
SSBP1-206ENST00000467681 PSMB4P28070 264 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 IGFALSP35858 605 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 ETV3P41162 512 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 STC1P52823 247 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 GDF10P55107 478 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 YPEL5P62699 121 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 GALNT3Q14435 633 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 INPP5AQ14642 412 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 DENND2CQ68D51 928 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 RANBP10Q6VN20 620 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 DBX2Q6ZNG2 339 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 ARHGEF18Q6ZSZ5 1173 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 KLHDC8BQ8IXV7 354 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 IPMKQ8NFU5 416 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 COG1Q8WTW3 980 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 DTD2Q96FN9 168 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 MS4A14Q96JA4 679 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 PPP1R2P1Q96PQ5 205 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 WDR24Q96S15 920 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 OSBPL9Q96SU4 736 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 ELF4Q99607 663 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-206ENST00000467681 RTKNQ9BST9 563 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 SNX12Q9UMY4 172 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 PCDHGB2Q9Y5G2 931 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 USP34Q70CQ2 3546 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 ADAMTS9Q9P2N4 1935 aa13.62□□□□□ -0.23
SSBP1-206ENST00000467681 SPTY2D1-AS1A0A0U1RR47 76 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 A0A1B0GTQ1 180 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 CES2O00748 559 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 PCDHGA12O60330 932 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 METTL18O95568 372 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 HOXC4P09017 264 aaPredicted RBP13.61□□□□□ -0.23
SSBP1-206ENST00000467681 CD59P13987 128 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 ADRA1AP35348 466 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 TRIM23P36406 574 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 MTM1Q13496 603 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 FZD2Q14332 565 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 PUM1Q14671 1186 aaKnown RBP eCLIP13.61□□□□□ -0.23
SSBP1-206ENST00000467681 SUZ12Q15022 739 aaKnown RBP13.61□□□□□ -0.23
SSBP1-206ENST00000467681 SHBQ15464 509 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 P3H1Q32P28 736 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 SIRPB2Q5JXA9 342 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 PNCKQ6P2M8 343 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 KDM7AQ6ZMT4 941 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 RFLNAQ6ZTI6 216 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 TMC3Q7Z5M5 1100 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 PTAR1Q7Z6K3 402 aaPredicted RBP13.61□□□□□ -0.23
SSBP1-206ENST00000467681 NRSN1Q8IZ57 195 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 SLC22A18ASQ8N1D0 253 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 OXR1Q8N573 874 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 SLC25A41Q8N5S1 370 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 PRELID2Q8N945 189 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 CCHCR1Q8TD31 782 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 ACTRT1Q8TDG2 376 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 APOOQ9BUR5 198 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 ABCG8Q9H221 673 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 TM7SF3Q9NS93 570 aa13.61□□□□□ -0.23
SSBP1-206ENST00000467681 C1orf232A0A0U1RR37 186 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 PSMD3O43242 534 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 PLXNA2O75051 1894 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 IFNB1P01574 187 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 C1SP09871 688 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 TCP1P17987 556 aaKnown RBP13.6□□□□□ -0.23
SSBP1-206ENST00000467681 HLA-DPA1P20036 260 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 TEAD1P28347 426 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 CHRNA4P43681 627 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 TNNT3P45378 269 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-206ENST00000467681 SPINT3P49223 89 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 ARRB1P49407 418 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-206ENST00000467681 DPTQ07507 201 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 PDE1CQ14123 709 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-206ENST00000467681 PTK2BQ14289 1009 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 SLC1A5Q15758 541 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 TPRG1LQ5T0D9 272 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 PAPD7Q5XG87 772 aaKnown RBP13.6□□□□□ -0.23
SSBP1-206ENST00000467681 KCTD11Q693B1 232 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms