RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TCERG1O14776 1098 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 SOX30O94993 753 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 CSPG5O95196 566 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 PGM3O95394 542 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 HIST1H2ABP04908 130 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 CYP1A2P05177 515 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 IL7RP16871 459 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 HIST1H2ADP20671 130 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 FBLP22087 321 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 HOXC9P31274 260 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 PRCPP42785 496 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 CAMPP49913 170 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 ENTPD1P49961 510 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 MRPL12P52815 198 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 NANOS3P60323 173 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 ACSM2AQ08AH3 577 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 GRIK2Q13002 908 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 IKQ13123 557 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 BECN1Q14457 450 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 NTRK2Q16620 822 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 C2orf68Q2NKX9 166 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 ASTE1Q2TB18 679 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 OTUD1Q5VV17 481 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 ACSM2BQ68CK6 577 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 GPR139Q6DWJ6 353 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 TMCO3Q6UWJ1 677 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 KRBA2Q6ZNG9 492 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 QSOX2Q6ZRP7 698 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 MTSS1LQ765P7 747 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 HIST3H2AQ7L7L0 130 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 ZNF367Q7RTV3 350 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 CACNA2D4Q7Z3S7 1137 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 ADGRA1Q86SQ6 560 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 TSPAN33Q86UF1 283 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 POC5Q8NA72 575 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 C7orf57Q8NEG2 295 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 TRIB2Q92519 343 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 NLRP4Q96MN2 994 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 SLF1Q9BQI6 1058 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 MXD3Q9BW11 206 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 KRCC1Q9NPI7 259 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 GPR108Q9NPR9 543 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 POT1Q9NUX5 634 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 CISD1Q9NZ45 108 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 COPG2Q9UBF2 871 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 EXO1Q9UQ84 846 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 PAM16Q9Y3D7 125 aa4.46□□□□□ -1.7
CDC42BPA-211ENST00000466538 LY6G6EA0A0G2JKS1 128 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 A0A1B0GVM2 712 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 ASAP2O43150 1006 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 LDB2O43679 373 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 ITM2AO43736 263 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 GPC4O75487 556 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 ERAL1O75616 437 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 GJB3O75712 270 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 SYF2O95926 243 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 NAGAP17050 411 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 IL11P20809 199 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 MAOAP21397 527 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 KRT20P35900 424 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 KCNJ4P48050 445 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 PLCD1P51178 756 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 PMS2P54278 862 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 P2RX3P56373 397 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 C21orf58P58505 322 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 MRPS5P82675 430 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 MRPS34P82930 218 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 LAMB3Q13751 1172 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 GPR18Q14330 331 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 CDONQ4KMG0 1287 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 DNTTIP2Q5QJE6 756 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 GGNBP1Q5YKI7 109 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 NUGGCQ68CJ6 796 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 SIGIRRQ6IA17 410 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 KIAA0930Q6ICG6 404 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 NAA16Q6N069 864 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 PQLC2Q6ZP29 291 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 CFAP77Q6ZQR2 320 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 PIM3Q86V86 326 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 EPHX4Q8IUS5 362 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 MCEMP1Q8IX19 187 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 SPATA6LQ8N4H0 392 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 OR14L1PQ8NHC6 308 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 GPT2Q8TD30 523 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 IGSF8Q969P0 613 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 SLC25A28Q96A46 364 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 LRRC59Q96AG4 307 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 RRNAD1Q96FB5 475 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 PPP1R13BQ96KQ4 1090 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 LRFN5Q96NI6 719 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 NDST4Q9H3R1 872 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 OSGEPL1Q9H4B0 414 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 PLK3Q9H4B4 646 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 MAGIXQ9H6Y5 334 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 HINT3Q9NQE9 182 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 TMEM51Q9NW97 253 aa4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 CWC15Q9P013 229 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 SEC63Q9UGP8 760 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-211ENST00000466538 KAT6BQ8WYB5 2073 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms