RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 CWF19L1Q69YN2 538 aaKnown RBP13.41□□□□□ -0.26
ATF3-208ENST00000465155 DPPA4Q7L190 304 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 NLRP9Q7RTR0 991 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 PGBD3Q8N328 593 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 SPEM1Q8N4L4 309 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.41□□□□□ -0.26
ATF3-208ENST00000465155 OR13C4Q8NGS5 318 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 UHMK1Q8TAS1 419 aaKnown RBP13.41□□□□□ -0.26
ATF3-208ENST00000465155 GSDMBQ8TAX9 411 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 STYXQ8WUJ0 223 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 RAB7BQ96AH8 199 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 EID2BQ96D98 161 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 DNAJC1Q96KC8 554 aaKnown RBP13.41□□□□□ -0.26
ATF3-208ENST00000465155 HHIPQ96QV1 700 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 EPB41L4BQ9H329 900 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 BPIFA1Q9NP55 256 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 BCCIPQ9P287 314 aaKnown RBP eCLIP13.41□□□□□ -0.26
ATF3-208ENST00000465155 GGT7Q9UJ14 662 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 FAM169AQ9Y6X4 670 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 BPTFQ12830 3046 aa13.41□□□□□ -0.26
ATF3-208ENST00000465155 LRRK1Q38SD2 2015 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 ZCWPW2A0A1B0GU75 182 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 CCL22O00626 93 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 NEMP1O14524 444 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 AREL1O15033 823 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 STX7O15400 261 aaKnown RBP13.4□□□□□ -0.26
ATF3-208ENST00000465155 SPINT1O43278 529 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 SPAG6O75602 509 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 PAPSS2O95340 614 aaPredicted RBP13.4□□□□□ -0.26
ATF3-208ENST00000465155 GSTA2P09210 222 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 TSHRP16473 764 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 PHBP35232 272 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 TMPRSS15P98073 1019 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 CCDC15Q0P6D6 951 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 RALGDSQ12967 914 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 MTAPQ13126 283 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 SMAD1Q15797 465 aaKnown RBP13.4□□□□□ -0.26
ATF3-208ENST00000465155 CNGA3Q16281 694 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 SKIDA1Q1XH10 827 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 SPDYCQ5MJ68 293 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 ANO7Q6IWH7 933 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 TSTD1Q8NFU3 115 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 OR4K2Q8NGD2 314 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 OR13J1Q8NGT2 312 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 PBXIP1Q96AQ6 731 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 TREX1Q9NSU2 369 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 NLE1Q9NVX2 485 aaPredicted RBP13.4□□□□□ -0.26
ATF3-208ENST00000465155 IL1RAPL1Q9NZN1 696 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 PKP3Q9Y446 797 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 FADS3Q9Y5Q0 445 aa13.4□□□□□ -0.26
ATF3-208ENST00000465155 ZNF106Q9H2Y7 1883 aaKnown RBP13.4□□□□□ -0.26
ATF3-208ENST00000465155 TCRBV9S1A1TA0A576 114 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 PI15O43692 258 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 ALDH1A2O94788 518 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 ELFN1P0C7U0 828 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 C7P10643 843 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 ZNF30P17039 623 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 PTSQ03393 145 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 UNC5BQ8IZJ1 945 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 FBF1Q8TES7 1133 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 PEX13Q92968 403 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 WRAP53Q9BUR4 548 aaKnown RBP13.39□□□□□ -0.27
ATF3-208ENST00000465155 CD93Q9NPY3 652 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 PPANQ9NQ55 473 aaKnown RBP13.39□□□□□ -0.27
ATF3-208ENST00000465155 IL17CQ9P0M4 197 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 RIMKLBQ9ULI2 386 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 NCKAP1Q9Y2A7 1128 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 MUC3AQ02505 3323 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 A0A087WUV0 522 aaPredicted RBP13.39□□□□□ -0.27
ATF3-208ENST00000465155 GOLGA8CPA6NN73 597 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 AP1G1O43747 822 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 RPP40O75818 363 aaKnown RBP13.39□□□□□ -0.27
ATF3-208ENST00000465155 VAPBO95292 243 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 ABHD2P08910 425 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 C1SP09871 688 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 PAMP19021 973 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 STX2P32856 288 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 ARSDP51689 593 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 TAS2R38P59533 333 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 PRAMEP78395 509 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 ACVR1Q04771 509 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
ATF3-208ENST00000465155 CASP8Q14790 479 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 LONRF1Q17RB8 773 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 KIAA0930Q6ICG6 404 aaPredicted RBP13.39□□□□□ -0.27
ATF3-208ENST00000465155 TRMT10BQ6PF06 316 aaKnown RBP13.39□□□□□ -0.27
ATF3-208ENST00000465155 LIPIQ6XZB0 460 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 USP30Q70CQ3 517 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 FAM124AQ86V42 546 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 KBTBD6Q86V97 674 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 HDAC10Q969S8 669 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 FAM131CQ96AQ9 280 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 CERS2Q96G23 380 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 TBATAQ96M53 351 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 C20orf96Q9NUD7 363 aaPredicted RBP13.39□□□□□ -0.27
ATF3-208ENST00000465155 FZD4Q9ULV1 537 aa13.39□□□□□ -0.27
ATF3-208ENST00000465155 FNDC3AQ9Y2H6 1198 aaKnown RBP13.39□□□□□ -0.27
ATF3-208ENST00000465155 TECTAO75443 2155 aa13.38□□□□□ -0.27
ATF3-208ENST00000465155 TMEM221A6NGB7 291 aa13.38□□□□□ -0.27
ATF3-208ENST00000465155 H0Y858 1186 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms