RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CASP14P31944 242 aa9.44□□□□□ -0.9
APP-213ENST00000464867 CCL11P51671 97 aa9.44□□□□□ -0.9
APP-213ENST00000464867 CCNHP51946 323 aaPredicted RBP9.44□□□□□ -0.9
APP-213ENST00000464867 CDH4P55283 916 aa9.44□□□□□ -0.9
APP-213ENST00000464867 MAZP56270 477 aaKnown RBP9.44□□□□□ -0.9
APP-213ENST00000464867 HDAC4P56524 1084 aa9.44□□□□□ -0.9
APP-213ENST00000464867 YWHAEP62258 255 aaKnown RBP9.44□□□□□ -0.9
APP-213ENST00000464867 DNM1Q05193 864 aaKnown RBP9.44□□□□□ -0.9
APP-213ENST00000464867 CDK18Q07002 472 aa9.44□□□□□ -0.9
APP-213ENST00000464867 SLC20A2Q08357 652 aa9.44□□□□□ -0.9
APP-213ENST00000464867 PEX6Q13608 980 aa9.44□□□□□ -0.9
APP-213ENST00000464867 INPP5AQ14642 412 aa9.44□□□□□ -0.9
APP-213ENST00000464867 NR1D2Q14995 579 aa9.44□□□□□ -0.9
APP-213ENST00000464867 SNAP47Q5SQN1 464 aa9.44□□□□□ -0.9
APP-213ENST00000464867 C6orf15Q6UXA7 325 aaPredicted RBP9.44□□□□□ -0.9
APP-213ENST00000464867 TMEM135Q86UB9 458 aa9.44□□□□□ -0.9
APP-213ENST00000464867 SLC47A2Q86VL8 602 aa9.44□□□□□ -0.9
APP-213ENST00000464867 RHOT1Q8IXI2 618 aa9.44□□□□□ -0.9
APP-213ENST00000464867 BMPERQ8N8U9 685 aa9.44□□□□□ -0.9
APP-213ENST00000464867 DCAF4L2Q8NA75 395 aa9.44□□□□□ -0.9
APP-213ENST00000464867 OR52K2Q8NGK3 314 aa9.44□□□□□ -0.9
APP-213ENST00000464867 CLEC4CQ8WTT0 213 aa9.44□□□□□ -0.9
APP-213ENST00000464867 THAP4Q8WY91 577 aa9.44□□□□□ -0.9
APP-213ENST00000464867 CLIC6Q96NY7 704 aa9.44□□□□□ -0.9
APP-213ENST00000464867 TRIM55Q9BYV6 548 aa9.44□□□□□ -0.9
APP-213ENST00000464867 ULBP3Q9BZM4 244 aa9.44□□□□□ -0.9
APP-213ENST00000464867 SLC39A2Q9NP94 309 aa9.44□□□□□ -0.9
APP-213ENST00000464867 HECAQ9UBI9 543 aaPredicted RBP9.44□□□□□ -0.9
APP-213ENST00000464867 FBXO2Q9UK22 296 aaPredicted RBP9.44□□□□□ -0.9
APP-213ENST00000464867 CROTQ9UKG9 612 aa9.44□□□□□ -0.9
APP-213ENST00000464867 VANGL2Q9ULK5 521 aa9.44□□□□□ -0.9
APP-213ENST00000464867 NOVA2Q9UNW9 492 aaKnown RBP9.44□□□□□ -0.9
APP-213ENST00000464867 OR1A2Q9Y585 309 aa9.44□□□□□ -0.9
APP-213ENST00000464867 A8MU76 341 aa9.43□□□□□ -0.9
APP-213ENST00000464867 CACNB4O00305 520 aaPredicted RBP9.43□□□□□ -0.9
APP-213ENST00000464867 LRRTM2O43300 516 aa9.43□□□□□ -0.9
APP-213ENST00000464867 ADCY5O95622 1261 aa9.43□□□□□ -0.9
APP-213ENST00000464867 TRUB2O95900 331 aaKnown RBP9.43□□□□□ -0.9
APP-213ENST00000464867 FYNP06241 537 aa9.43□□□□□ -0.9
APP-213ENST00000464867 KRT13P13646 458 aa9.43□□□□□ -0.9
APP-213ENST00000464867 DRD2P14416 443 aa9.43□□□□□ -0.9
APP-213ENST00000464867 XPAP23025 273 aaPredicted RBP9.43□□□□□ -0.9
APP-213ENST00000464867 F8A1P23610 371 aa9.43□□□□□ -0.9
APP-213ENST00000464867 NFKBIAP25963 317 aa9.43□□□□□ -0.9
APP-213ENST00000464867 CCR1P32246 355 aa9.43□□□□□ -0.9
APP-213ENST00000464867 ITGA1P56199 1179 aa9.43□□□□□ -0.9
APP-213ENST00000464867 GPLD1P80108 840 aa9.43□□□□□ -0.9
APP-213ENST00000464867 SQSTM1Q13501 440 aa9.43□□□□□ -0.9
APP-213ENST00000464867 AUHQ13825 339 aaKnown RBP9.43□□□□□ -0.9
APP-213ENST00000464867 TESK1Q15569 626 aa9.43□□□□□ -0.9
APP-213ENST00000464867 PAPD7Q5XG87 772 aaKnown RBP9.43□□□□□ -0.9
APP-213ENST00000464867 PMF1Q6P1K2 205 aa9.43□□□□□ -0.9
APP-213ENST00000464867 UNC13DQ70J99 1090 aa9.43□□□□□ -0.9
APP-213ENST00000464867 INTS8Q75QN2 995 aaKnown RBP9.43□□□□□ -0.9
APP-213ENST00000464867 BEND5Q7L4P6 421 aa9.43□□□□□ -0.9
APP-213ENST00000464867 SFTPA2Q8IWL1 248 aa9.43□□□□□ -0.9
APP-213ENST00000464867 Q8NA96 180 aa9.43□□□□□ -0.9
APP-213ENST00000464867 OR56A4Q8NGH8 313 aa9.43□□□□□ -0.9
APP-213ENST00000464867 SLC35F5Q8WV83 523 aa9.43□□□□□ -0.9
APP-213ENST00000464867 SNRNP40Q96DI7 357 aaKnown RBP9.43□□□□□ -0.9
APP-213ENST00000464867 C19orf60Q96EN9 201 aa9.43□□□□□ -0.9
APP-213ENST00000464867 STAMBPL1Q96FJ0 436 aa9.43□□□□□ -0.9
APP-213ENST00000464867 PDXPQ96GD0 296 aa9.43□□□□□ -0.9
APP-213ENST00000464867 HSFY1Q96LI6 401 aa9.43□□□□□ -0.9
APP-213ENST00000464867 WRAP53Q9BUR4 548 aaKnown RBP9.43□□□□□ -0.9
APP-213ENST00000464867 OSBPL1AQ9BXW6 950 aa9.43□□□□□ -0.9
APP-213ENST00000464867 CUEDC2Q9H467 287 aa9.43□□□□□ -0.9
APP-213ENST00000464867 ZSCAN16Q9H4T2 348 aaPredicted RBP9.43□□□□□ -0.9
APP-213ENST00000464867 FAM204AQ9H8W3 233 aa9.43□□□□□ -0.9
APP-213ENST00000464867 MLXIPLQ9NP71 852 aa9.43□□□□□ -0.9
APP-213ENST00000464867 TPSG1Q9NRR2 321 aa9.43□□□□□ -0.9
APP-213ENST00000464867 ASF1BQ9NVP2 202 aa9.43□□□□□ -0.9
APP-213ENST00000464867 DMAC2Q9NW81 257 aa9.43□□□□□ -0.9
APP-213ENST00000464867 COPG2Q9UBF2 871 aa9.43□□□□□ -0.9
APP-213ENST00000464867 MOSPD1Q9UJG1 213 aa9.43□□□□□ -0.9
APP-213ENST00000464867 IGHV1OR21-1A0A087WYE8 117 aa9.42□□□□□ -0.9
APP-213ENST00000464867 ZSCAN5CA6NGD5 496 aaPredicted RBP9.42□□□□□ -0.9
APP-213ENST00000464867 KRIT1O00522 736 aa9.42□□□□□ -0.9
APP-213ENST00000464867 MAP3K6O95382 1288 aa9.42□□□□□ -0.9
APP-213ENST00000464867 ECEL1O95672 775 aa9.42□□□□□ -0.9
APP-213ENST00000464867 DLGAP3O95886 979 aa9.42□□□□□ -0.9
APP-213ENST00000464867 NR3C1P04150 777 aa9.42□□□□□ -0.9
APP-213ENST00000464867 COX6B1P14854 86 aa9.42□□□□□ -0.9
APP-213ENST00000464867 EPB42P16452 691 aa9.42□□□□□ -0.9
APP-213ENST00000464867 CAPN3P20807 821 aa9.42□□□□□ -0.9
APP-213ENST00000464867 SERPINH1P50454 418 aaKnown RBP9.42□□□□□ -0.9
APP-213ENST00000464867 RAPGEF1Q13905 1077 aa9.42□□□□□ -0.9
APP-213ENST00000464867 C11orf91Q3C1V1 193 aa9.42□□□□□ -0.9
APP-213ENST00000464867 EFHC1Q5JVL4 640 aa9.42□□□□□ -0.9
APP-213ENST00000464867 SYPL2Q5VXT5 272 aa9.42□□□□□ -0.9
APP-213ENST00000464867 SLC6A19Q695T7 634 aa9.42□□□□□ -0.9
APP-213ENST00000464867 KRT39Q6A163 491 aa9.42□□□□□ -0.9
APP-213ENST00000464867 LCLAT1Q6UWP7 414 aa9.42□□□□□ -0.9
APP-213ENST00000464867 SETD3Q86TU7 594 aaPredicted RBP9.42□□□□□ -0.9
APP-213ENST00000464867 OR10G6Q8NH81 332 aa9.42□□□□□ -0.9
APP-213ENST00000464867 TMEM174Q8WUU8 243 aa9.42□□□□□ -0.9
APP-213ENST00000464867 PSMB7Q99436 277 aa9.42□□□□□ -0.9
APP-213ENST00000464867 SPON2Q9BUD6 331 aa9.42□□□□□ -0.9
APP-213ENST00000464867 GSDMCQ9BYG8 508 aa9.42□□□□□ -0.9
APP-213ENST00000464867 TMEM168Q9H0V1 697 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms