RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 PPIL1Q9Y3C6 166 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 SAR1BQ9Y6B6 198 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 CACNA1AO00555 2505 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 A0A0J9YYE9 177 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 SPTY2D1-AS1A0A0U1RR47 76 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 F5H423 210 aaPredicted RBP17.06■□□□□ 0.32
VPS52-215ENST00000464425 FANCGO15287 622 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 YKT6O15498 198 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 CBFA2T3O75081 653 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 TRBC1P01850 177 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 CASQ1P31415 396 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 GRK6P43250 576 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 THOP1P52888 689 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 EIF3EP60228 445 aaKnown RBP17.06■□□□□ 0.32
VPS52-215ENST00000464425 ARHGEF7Q14155 803 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 PCSK7Q16549 785 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 CRTC1Q6UUV9 634 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 HSD11B1LQ7Z5J1 315 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 PLA2G15Q8NCC3 412 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 SPATA22Q8NHS9 363 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 COG1Q8WTW3 980 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 COQ10AQ96MF6 247 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 MCCC1Q96RQ3 725 aaPredicted RBP17.06■□□□□ 0.32
VPS52-215ENST00000464425 NAP1L3Q99457 506 aaPredicted RBP17.06■□□□□ 0.32
VPS52-215ENST00000464425 UBP1Q9NZI7 540 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 KLHL8Q9P2G9 620 aaPredicted RBP17.06■□□□□ 0.32
VPS52-215ENST00000464425 OR1A2Q9Y585 309 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 LRRK1Q38SD2 2015 aa17.06■□□□□ 0.32
VPS52-215ENST00000464425 TP53BP1Q12888 1972 aaPredicted RBP17.06■□□□□ 0.32
VPS52-215ENST00000464425 KIF2AO00139 706 aaPredicted RBP17.05■□□□□ 0.32
VPS52-215ENST00000464425 MT-CYBP00156 380 aaPredicted RBP17.05■□□□□ 0.32
VPS52-215ENST00000464425 RBL1P28749 1068 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 CD68P34810 354 aaPredicted RBP17.05■□□□□ 0.32
VPS52-215ENST00000464425 ETV3P41162 512 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 GALNT3Q14435 633 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 AGERQ15109 404 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 QPCTQ16769 361 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 LONRF2Q1L5Z9 754 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 LRRC66Q68CR7 880 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 SYT10Q6XYQ8 523 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 PID1Q7Z2X4 250 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 PARGQ86W56 976 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 ZNF567Q8N184 647 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 EID2Q8N6I1 236 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 SLC35B2Q8TB61 432 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 C16orf45Q96MC5 204 aaPredicted RBP17.05■□□□□ 0.32
VPS52-215ENST00000464425 HOMER3Q9NSC5 361 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 UCKL1Q9NWZ5 548 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 KLF15Q9UIH9 416 aa17.05■□□□□ 0.32
VPS52-215ENST00000464425 NCOR2Q9Y618 2525 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 ANKRD66B4E2M5 251 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 PGRMC1O00264 195 aaKnown RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 PMPCBO75439 489 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 RBP3P10745 1247 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 NFKB1P19838 968 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 RPL26P61254 145 aaKnown RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 YPEL5P62699 121 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 EIF2B5Q13144 721 aaKnown RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 PTK2BQ14289 1009 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 SIX1Q15475 284 aaPredicted RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 CCNG2Q16589 344 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 DRICH1Q6PGQ1 229 aaPredicted RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 DARS2Q6PI48 645 aaKnown RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 RFLNAQ6ZTI6 216 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 Q6ZVL8 140 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 KANSL1Q7Z3B3 1105 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 CDKL3Q8IVW4 592 aaPredicted RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 CBARPQ8N350 705 aaPredicted RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 SLC25A45Q8N413 288 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 NUS1Q96E22 293 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 MS4A14Q96JA4 679 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 VAT1Q99536 393 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 FERMT1Q9BQL6 677 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 APOOQ9BUR5 198 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 ADGRE3Q9BY15 652 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 RNF14Q9UBS8 474 aa17.04■□□□□ 0.32
VPS52-215ENST00000464425 RPL26L1Q9UNX3 145 aaKnown RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 R3HDM2Q9Y2K5 976 aaKnown RBP17.04■□□□□ 0.32
VPS52-215ENST00000464425 TDRD6O60522 2096 aaKnown RBP17.03■□□□□ 0.32
VPS52-215ENST00000464425 K7ESM1 405 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 CLDN7O95471 211 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 CSF2P04141 144 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 ADRB1P08588 477 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 JUNDP17535 347 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 DGKAP23743 735 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 PTSQ03393 145 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 MTM1Q13496 603 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 INAVAQ3KP66 663 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 PELI3Q8N2H9 469 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 BAHD1Q8TBE0 780 aaPredicted RBP17.03■□□□□ 0.32
VPS52-215ENST00000464425 TADA1Q96BN2 335 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 DTD2Q96FN9 168 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 IFT43Q96FT9 208 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 TRIB3Q96RU7 358 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 CDC6Q99741 560 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 MLPHQ9BV36 600 aaPredicted RBP17.03■□□□□ 0.32
VPS52-215ENST00000464425 CD84Q9UIB8 345 aa17.03■□□□□ 0.32
VPS52-215ENST00000464425 PNMA8BQ9ULN7 279 aaPredicted RBP17.03■□□□□ 0.32
VPS52-215ENST00000464425 GOLGA6CA6NDK9 693 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 GOLGA6BA6NDN3 693 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms