RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 BTBD19C9JJ37 291 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 PQBP1O60828 265 aaKnown RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 SORBS2O94875 1100 aaKnown RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 CLIC3O95833 236 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 YAP1P46937 504 aaKnown RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 SLC10A2Q12908 348 aaPredicted RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 MADCAM1Q13477 382 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 PTPRCAPQ14761 206 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 RBM20Q5T481 1227 aaKnown RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 IL23RQ5VWK5 629 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 CGB2Q6NT52 195 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 ZYG11AQ6WRX3 759 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 GPRIN3Q6ZVF9 776 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 TMEM110Q86TL2 294 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 OR8H2Q8N162 312 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 PNPT1Q8TCS8 783 aaKnown RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 GIPC3Q8TF64 312 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 CASP10Q92851 521 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 SNX27Q96L92 541 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 SLC39A8Q9C0K1 460 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 RMND5AQ9H871 391 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 USP29Q9HBJ7 922 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 STARD7Q9NQZ5 370 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 PNPLA3Q9NST1 481 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 DNAJC28Q9NX36 388 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 GMIPQ9P107 970 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 POLR3HQ9Y535 204 aaPredicted RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 TRAFD1O14545 582 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 LIN7AO14910 233 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 ZBTB14O43829 449 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 AHSGP02765 367 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 ALDOAP04075 364 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 GSTM1P09488 218 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 MTHFD1P11586 935 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 ATP5C1P36542 298 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 PBX3P40426 434 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 CRYBB1P53674 252 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 ST8SIA6P61647 398 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 SIM2Q14190 667 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 TSNQ15631 228 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 METTL21CQ5VZV1 264 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 CLEC20AQ6ZU45 233 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 GALNT5Q7Z7M9 940 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 C8orf59Q8N0T1 100 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 TOP6BLQ8N6T0 577 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 ADCY4Q8NFM4 1077 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 GRIN3AQ8TCU5 1115 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 SLC35F5Q8WV83 523 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 TWIST2Q8WVJ9 160 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 CANT1Q8WVQ1 401 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 MRPS31Q92665 395 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 GMLQ99445 158 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 OSBPL11Q9BXB4 747 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 CLK4Q9HAZ1 481 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 USE1Q9NZ43 259 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 ULK1O75385 1050 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 TRMUO75648 421 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 CST1P01037 141 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 HK2P52789 917 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 SPIDRQ14159 915 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 PRMT9Q6P2P2 845 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 DCLRE1AQ6PJP8 1040 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 HNRNPABQ99729 332 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 UBAP1Q9NZ09 502 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 LEF1Q9UJU2 399 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 A0A1W2PQ67 120 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 E9PAM4 449 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 FAM72CH0Y354 149 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 PIP5K1BO14986 540 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 DLX3O60479 287 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 EDN1P05305 212 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 T-ENOLP0DO92 83 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 ALDH4A1P30038 563 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 MC4RP32245 332 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 GPC1P35052 558 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 PCLAFQ15004 111 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 FAM72AQ5TYM5 149 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 FAM72DQ6L9T8 149 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 RETSATQ6NUM9 610 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 ABRAXAS1Q6UWZ7 409 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 PIM3Q86V86 326 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 FAM72BQ86X60 149 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 STX19Q8N4C7 294 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 GPR156Q8NFN8 814 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 SKA1Q96BD8 255 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 MLPHQ9BV36 600 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 STRA6Q9BX79 667 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 MRPS26Q9BYN8 205 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 RASSF1Q9NS23 344 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 TCAF1Q9Y4C2 921 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 LRRC42Q9Y546 428 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 CNPP09543 421 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 ALOX12P18054 663 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 CHI3L1P36222 383 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 BCL2L1Q07817 233 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 CSTF3Q12996 717 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 TRIM25Q14258 630 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 ARMC12Q5T9G4 340 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 REP15Q6BDI9 236 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 C15orf39Q6ZRI6 1047 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms