RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 EEFSECP57772 596 aaKnown RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 BST2Q10589 180 aaKnown RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 TRAF2Q12933 501 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 IL18R1Q13478 541 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 BTG3Q14201 252 aaPredicted RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 RAB39AQ14964 217 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 RPS6KA2Q15349 733 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 ARL13BQ3SXY8 428 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SLC25A52Q3SY17 297 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 PCID2Q5JVF3 399 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 PPM1LQ5SGD2 360 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 DEPDC1Q5TB30 811 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 GPR107Q5VW38 600 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 BSPRYQ5W0U4 402 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SNRNP48Q6IEG0 339 aaKnown RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 ANKRD26P1Q6NSI1 321 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 FAM117BQ6P1L5 589 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 DCLRE1AQ6PJP8 1040 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 NAPRTQ6XQN6 538 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 KCTD8Q6ZWB6 473 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 FASTKD5Q7L8L6 764 aaKnown RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 PLPPR4Q7Z2D5 763 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 TFAP2DQ7Z6R9 452 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 CMC1Q7Z7K0 106 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 CNTN4Q8IWV2 1026 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 MIER2Q8N344 545 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 TMCO5AQ8N6Q1 288 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 KDM1BQ8NB78 822 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 RNF149Q8NC42 400 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 PIK3C3Q8NEB9 887 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 AGBL3Q8NEM8 1001 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 ZNF555Q8NEP9 628 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 UBA3Q8TBC4 463 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 ZSCAN18Q8TBC5 510 aaPredicted RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 CYGBQ8WWM9 190 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 HDAC2Q92769 488 aaKnown RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 MYO19Q96H55 970 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 MYRFLQ96LU7 910 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 TRIM62Q9BVG3 475 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 KIFC1Q9BW19 673 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SEZ6LQ9BYH1 1024 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 GBA3Q9H227 469 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SEMA6AQ9H2E6 1030 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 IGFLR1Q9H665 355 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 RPAP3Q9H6T3 665 aaPredicted RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 TMEM165Q9HC07 324 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 PTPRHQ9HD43 1115 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SLC38A7Q9NVC3 462 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SETD4Q9NVD3 440 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 RIC8BQ9NVN3 520 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SMOXQ9NWM0 555 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 DUS2Q9NX74 493 aaKnown RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 HOXC10Q9NYD6 342 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 ABCD2Q9UBJ2 740 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 EBF1Q9UH73 591 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 ZDHHC2Q9UIJ5 367 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 DAPK2Q9UIK4 370 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 ANAPC2Q9UJX6 822 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 GIT1Q9Y2X7 761 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 PSAT1Q9Y617 370 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SCN9AQ15858 1988 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 PHIPQ8WWQ0 1821 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 TANC1Q9C0D5 1861 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 UNCXA6NJT0 531 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 FAM229AH3BQW9 127 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 INO80B-WBP1J3KQ70 363 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 K7EPI3 171 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 UBXN8O00124 270 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 EEF2KO00418 725 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 MAGEB3O15480 346 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CSPG5O95196 566 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 FKBP9O95302 570 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 MATN4O95460 622 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 F9P00740 461 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CHRNGP07510 517 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 PCSK2P16519 638 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ZNF24P17028 368 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 TCN1P20061 433 aaPredicted RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 EEF1B2P24534 225 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 SERPINB1P30740 379 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ARRB2P32121 409 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CYP2C18P33260 490 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 GRIK1P39086 918 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 PNPLA4P41247 253 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 GRIA3P42263 894 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 RAP1GAPP47736 663 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 IREB2P48200 963 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 RPL34P49207 117 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 MRPL19P49406 292 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CSRP3P50461 194 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CLCN5P51795 746 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 BMXP51813 675 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 NRLP54845 237 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 TPD52P55327 224 aaPredicted RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 SP4Q02446 784 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 PEX6Q13608 980 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ATP1A4Q13733 1029 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 GK3PQ14409 553 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ACAP2Q15057 778 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms