RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 FGF22Q9HCT0 170 aa23.3■■□□□ 1.32
SSNA1-203ENST00000463511 MRPL40Q9NQ50 206 aaKnown RBP23.3■■□□□ 1.32
SSNA1-203ENST00000463511 LOXL2Q9Y4K0 774 aa23.3■■□□□ 1.32
SSNA1-203ENST00000463511 TMEM202A6NGA9 273 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 PRAMEF11O60813 436 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 ITIH1P19827 911 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 MAGEA1P43355 309 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 AIF1P55008 147 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 RALGDSQ12967 914 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 CERCAMQ5T4B2 595 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 PRICKLE2Q7Z3G6 844 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 TAF8Q7Z7C8 310 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 FAM46DQ8NEK8 389 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 CTNNBL1Q8WYA6 563 aaPredicted RBP23.29■■□□□ 1.32
SSNA1-203ENST00000463511 FUBP1Q96AE4 644 aaKnown RBP23.29■■□□□ 1.32
SSNA1-203ENST00000463511 TUBGCP5Q96RT8 1024 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 CNPY3Q9BT09 278 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 NUP85Q9BW27 656 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 ATP13A3Q9H7F0 1226 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 GPATCH2LQ9NWQ4 482 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 ACSL6Q9UKU0 697 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 INTUQ9ULD6 942 aa23.29■■□□□ 1.32
SSNA1-203ENST00000463511 B4DGG1 531 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 CACNB4O00305 520 aaPredicted RBP23.28■■□□□ 1.32
SSNA1-203ENST00000463511 GLB1P16278 677 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 SERPINA4P29622 427 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 KIAA1024LP59773 190 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 USP53Q70EK8 1073 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 SPRED1Q7Z699 444 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 SRLQ86TD4 932 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 EXD3Q8N9H8 876 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 TSEN2Q8NCE0 465 aaKnown RBP23.28■■□□□ 1.32
SSNA1-203ENST00000463511 OR56A4Q8NGH8 313 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 FNIP1Q8TF40 1166 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 CLMPQ9H6B4 373 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 APPL1Q9UKG1 709 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 PCDHA13Q9Y5I0 950 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 ZFC3H1O60293 1989 aaKnown RBP23.28■■□□□ 1.32
SSNA1-203ENST00000463511 SDK2Q58EX2 2172 aa23.28■■□□□ 1.32
SSNA1-203ENST00000463511 RECQL5O94762 991 aaPredicted RBP23.27■■□□□ 1.32
SSNA1-203ENST00000463511 ELFN1P0C7U0 828 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 LIPCP11150 499 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 NDST2P52849 883 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 NFATC3Q12968 1075 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 SPA17Q15506 151 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 LRRC8AQ8IWT6 810 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 SGF29Q96ES7 293 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 SLC39A8Q9C0K1 460 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 TMEM168Q9H0V1 697 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 REXO2Q9Y3B8 237 aaKnown RBP23.27■■□□□ 1.32
SSNA1-203ENST00000463511 RNF215Q9Y6U7 377 aa23.27■■□□□ 1.32
SSNA1-203ENST00000463511 PRAMEF33A0A0G2JMD5 474 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 NVLO15381 856 aaKnown RBP23.26■■□□□ 1.31
SSNA1-203ENST00000463511 PRAMEF10O60809 474 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 PALMO75781 387 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 PSMA2P25787 234 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 ETV5P41161 510 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 PAPOLAP51003 745 aaKnown RBP23.26■■□□□ 1.31
SSNA1-203ENST00000463511 LINC00303Q3SY05 128 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 C14orf28Q4W4Y0 310 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 OGFOD3Q6PK18 319 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 LIPIQ6XZB0 460 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 PAF1Q8N7H5 531 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 ANP32BQ92688 251 aaKnown RBP23.26■■□□□ 1.31
SSNA1-203ENST00000463511 EXTL1Q92935 676 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 PDLIM2Q96JY6 352 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 LRIT1Q9P2V4 623 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 MOSPD1Q9UJG1 213 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 AP4E1Q9UPM8 1137 aa23.26■■□□□ 1.31
SSNA1-203ENST00000463511 ARHGAP42A6NI28 874 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 EEF2KO00418 725 aaKnown RBP23.25■■□□□ 1.31
SSNA1-203ENST00000463511 HTR7P34969 479 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 CSNK1DP48730 415 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 KCNC4Q03721 635 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 ZFP36L1Q07352 338 aaKnown RBP23.25■■□□□ 1.31
SSNA1-203ENST00000463511 ARHGEF7Q14155 803 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 HLTFQ14527 1009 aaKnown RBP eCLIP23.25■■□□□ 1.31
SSNA1-203ENST00000463511 CA9Q16790 459 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 TMPRSS9Q7Z410 1059 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 VASH2Q86V25 355 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 ARFGAP1Q8N6T3 406 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 CCL4L1Q8NHW4 92 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 ZNF564Q8TBZ8 553 aaPredicted RBP23.25■■□□□ 1.31
SSNA1-203ENST00000463511 ECHDC3Q96DC8 303 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 BTBD6Q96KE9 485 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 CINPQ9BW66 212 aaPredicted RBP23.25■■□□□ 1.31
SSNA1-203ENST00000463511 LGR4Q9BXB1 951 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 DPEP2Q9H4A9 486 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 CYP4F12Q9HCS2 524 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 DONSONQ9NYP3 566 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 CTTNBP2NLQ9P2B4 639 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 UVRAGQ9P2Y5 699 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 TFR2Q9UP52 801 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 TLN1Q9Y490 2541 aaKnown RBP23.25■■□□□ 1.31
SSNA1-203ENST00000463511 MAST4O15021 2626 aa23.25■■□□□ 1.31
SSNA1-203ENST00000463511 HECTD1Q9ULT8 2610 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 CFAP69A5D8W1 941 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 A8MX80 341 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 PNLIPP16233 465 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 DESP17661 470 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms