RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PPP1R36Q96LQ0 422 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 MRPL57Q9BQC6 102 aaKnown RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 CCDC106Q9BWC9 280 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 DRC3Q9H069 523 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 CDH19Q9H159 772 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 CYP4F12Q9HCS2 524 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 TLR9Q9NR96 1032 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 FKBPLQ9UIM3 349 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 MED16Q9Y2X0 877 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 HCFC2Q9Y5Z7 792 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 IRAK3Q9Y616 596 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 OBSL1O75147 1896 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 FZD6O60353 706 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 DIAPH2O60879 1101 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 ZNF821O75541 412 aaPredicted RBP12.82□□□□□ -0.36
VAPB-203ENST00000463370 PIGNO95427 931 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 ENO1P06733 434 aaKnown RBP12.82□□□□□ -0.36
VAPB-203ENST00000463370 ALPIP09923 528 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 CTPS1P17812 591 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 FDXRP22570 491 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 PTPN4P29074 926 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 CDC25CP30307 473 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 PLK1P53350 603 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 NTHL1P78549 312 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 TEAD2Q15562 447 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 TSNAXIP1Q2TAA8 658 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 PPM1LQ5SGD2 360 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 ELMOD1Q8N336 334 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 TTC8Q8TAM2 541 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 RPL10LQ96L21 214 aaKnown RBP12.82□□□□□ -0.36
VAPB-203ENST00000463370 OSBPL1AQ9BXW6 950 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 EMILIN2Q9BXX0 1053 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 TNKS2Q9H2K2 1166 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 STK39Q9UEW8 545 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 ZDHHC2Q9UIJ5 367 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 RIMKLBQ9ULI2 386 aa12.82□□□□□ -0.36
VAPB-203ENST00000463370 ATP6V1G2O95670 118 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 JUNP05412 331 aaKnown RBP12.81□□□□□ -0.36
VAPB-203ENST00000463370 SERPINA6P08185 405 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 LTA4HP09960 611 aaKnown RBP12.81□□□□□ -0.36
VAPB-203ENST00000463370 EPCAMP16422 314 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 CES1P23141 567 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 STK19P49842 368 aaPredicted RBP12.81□□□□□ -0.36
VAPB-203ENST00000463370 RCN2Q14257 317 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 FAM83EQ2M2I3 478 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 TYSND1Q2T9J0 566 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 FAM91A1Q658Y4 838 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 PSAPL1Q6NUJ1 521 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 LONP2Q86WA8 852 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 LMNTD2Q8IXW0 634 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 CPXM2Q8N436 756 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 TTC30BQ8N4P2 665 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 CCNYL1Q8N7R7 359 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 VOPP1Q96AW1 172 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 PTERQ96BW5 349 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 CADM1Q9BY67 442 aaKnown RBP12.81□□□□□ -0.36
VAPB-203ENST00000463370 POMKQ9H5K3 350 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 DNAJC28Q9NX36 388 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 PRKAG2Q9UGJ0 569 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 EVLQ9UI08 416 aaPredicted RBP12.81□□□□□ -0.36
VAPB-203ENST00000463370 MID2Q9UJV3 735 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 SLC4A7Q9Y6M7 1214 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 PDE4DIPQ5VU43 2346 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 REV3LO60673 3130 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 MYO7AQ13402 2215 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 C2orf81A6NN90 581 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 TMEM233B4DJY2 109 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 ZBTB14O43829 449 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 OR1I1O60431 355 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 PMLP29590 882 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 PEX6Q13608 980 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 LAMB3Q13751 1172 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 SETMARQ53H47 684 aaPredicted RBP12.81□□□□□ -0.36
VAPB-203ENST00000463370 ZNF697Q5TEC3 545 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
VAPB-203ENST00000463370 TMEM25Q86YD3 366 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 GABPB2Q8TAK5 448 aaPredicted RBP12.81□□□□□ -0.36
VAPB-203ENST00000463370 MICAL1Q8TDZ2 1067 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 TSPAN17Q96FV3 270 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 GCNAQ96QF7 691 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 OR52B2Q96RD2 323 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 SIKE1Q9BRV8 207 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 C2orf49Q9BVC5 232 aaPredicted RBP12.81□□□□□ -0.36
VAPB-203ENST00000463370 ADGRE3Q9BY15 652 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 ALG9Q9H6U8 611 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 GALPQ9UBC7 116 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 BAIAP2L1Q9UHR4 511 aa12.81□□□□□ -0.36
VAPB-203ENST00000463370 DOCK6Q96HP0 2047 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 UBA6A0AVT1 1052 aaPredicted RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 LINC01553A4QN01 128 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 A8MT66 165 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 H3BMM5 538 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 HNRNPLP14866 589 aaKnown RBP eCLIP12.8□□□□□ -0.361e-7■■□□□ 12
VAPB-203ENST00000463370 CD1EP15812 388 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 TFEBP19484 476 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 OGNP20774 298 aaKnown RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 LPOP22079 712 aaPredicted RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 CALB2P22676 271 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 SP100P23497 879 aaPredicted RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 HLA-FP30511 346 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms