RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 A8MX80 341 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 FGF1P05230 155 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 ALDH4A1P30038 563 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 KRT31Q15323 416 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 NKD1Q969G9 470 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 PMEPA1Q969W9 287 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 COQ10AQ96MF6 247 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 NSMCE3Q96MG7 304 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 TAAR9Q96RI9 348 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 GSDMCQ9BYG8 508 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 ADNPQ9H2P0 1102 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 GPATCH2LQ9NWQ4 482 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 TAAR2Q9P1P5 351 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 AP4E1Q9UPM8 1137 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 SIK3Q9Y2K2 1263 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 PCDHGA3Q9Y5H0 932 aa20.76■□□□□ 0.91
CPSF7-209ENST00000463244 EEF2KO00418 725 aaKnown RBP20.75■□□□□ 0.91
CPSF7-209ENST00000463244 ZW10O43264 779 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 ECEL1O95672 775 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 FUCA1P04066 466 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 CEACAM5P06731 702 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 FGF3P11487 239 aaPredicted RBP20.75■□□□□ 0.91
CPSF7-209ENST00000463244 CD1CP29017 333 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 GPR3P46089 330 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 ATP1A2P50993 1020 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 OGDHQ02218 1023 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 TLE1Q04724 770 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 ILF3Q12906 894 aaKnown RBP eCLIP20.75■□□□□ 0.912e-6■■■■□ 21.5
CPSF7-209ENST00000463244 RFTN1Q14699 578 aaPredicted RBP20.75■□□□□ 0.91
CPSF7-209ENST00000463244 SYCP1Q15431 976 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 DCUN1D2Q6PH85 259 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 ARHGAP12Q8IWW6 846 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 PAF1Q8N7H5 531 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 SPOCK2Q92563 424 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 NUS1Q96E22 293 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 CCDC74BQ96LY2 380 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 TEX101Q9BY14 249 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 SP110Q9HB58 689 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 PHPT1Q9NRX4 125 aaPredicted RBP20.75■□□□□ 0.91
CPSF7-209ENST00000463244 SEPT11Q9NVA2 429 aaKnown RBP20.75■□□□□ 0.91
CPSF7-209ENST00000463244 TRNAU1APQ9NX07 287 aaKnown RBP20.75■□□□□ 0.91
CPSF7-209ENST00000463244 B4GALT6Q9UBX8 382 aa20.75■□□□□ 0.91
CPSF7-209ENST00000463244 ZFC3H1O60293 1989 aaKnown RBP20.75■□□□□ 0.91
CPSF7-209ENST00000463244 USP9YO00507 2555 aaPredicted RBP20.74■□□□□ 0.91
CPSF7-209ENST00000463244 NBPF19A0A087WUL8 3843 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 EIF3CLB5ME19 914 aaKnown RBP20.74■□□□□ 0.91
CPSF7-209ENST00000463244 AK4P27144 223 aaPredicted RBP20.74■□□□□ 0.91
CPSF7-209ENST00000463244 SCNN1BP51168 640 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 LIMK2P53671 638 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 AP1S1P61966 158 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 TRA2AQ13595 282 aaKnown RBP eCLIP20.74■□□□□ 0.91
CPSF7-209ENST00000463244 CNGA3Q16281 694 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 CA9Q16790 459 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 FKBP15Q5T1M5 1219 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 CDKAL1Q5VV42 579 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 BORAQ6PGQ7 559 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 ARHGAP36Q6ZRI8 547 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 HEATR4Q86WZ0 1026 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 EIF3CQ99613 913 aaKnown RBP20.74■□□□□ 0.91
CPSF7-209ENST00000463244 FRMD8Q9BZ67 464 aaPredicted RBP20.74■□□□□ 0.91
CPSF7-209ENST00000463244 SUDS3Q9H7L9 328 aaPredicted RBP20.74■□□□□ 0.91
CPSF7-209ENST00000463244 SUFUQ9UMX1 484 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 ST14Q9Y5Y6 855 aa20.74■□□□□ 0.91
CPSF7-209ENST00000463244 DFFAO00273 331 aa20.73■□□□□ 0.91
CPSF7-209ENST00000463244 DESP17661 470 aa20.73■□□□□ 0.91
CPSF7-209ENST00000463244 IL10RBQ08334 325 aa20.73■□□□□ 0.91
CPSF7-209ENST00000463244 NAGSQ8N159 534 aa20.73■□□□□ 0.91
CPSF7-209ENST00000463244 ENOX1Q8TC92 643 aaKnown RBP20.73■□□□□ 0.91
CPSF7-209ENST00000463244 PATE1Q8WXA2 126 aa20.73■□□□□ 0.91
CPSF7-209ENST00000463244 PSKH2Q96QS6 385 aa20.73■□□□□ 0.91
CPSF7-209ENST00000463244 AGPAT1Q99943 283 aa20.73■□□□□ 0.91
CPSF7-209ENST00000463244 CDH19Q9H159 772 aa20.73■□□□□ 0.91
CPSF7-209ENST00000463244 DHX35Q9H5Z1 703 aaKnown RBP20.73■□□□□ 0.91
CPSF7-209ENST00000463244 KCTD5Q9NXV2 234 aa20.73■□□□□ 0.91
CPSF7-209ENST00000463244 TEX15Q9BXT5 2789 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 HTRA2O43464 458 aaPredicted RBP20.72■□□□□ 0.91
CPSF7-209ENST00000463244 TPM2P07951 284 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 THRAP10827 490 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 ERCC2P18074 760 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 UGT1A3P35503 534 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 GNPDA1P46926 289 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 CDK3Q00526 305 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 SLC30A9Q6PML9 568 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 RFX8Q6ZV50 586 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 MCOLN2Q8IZK6 566 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 IL22RA1Q8N6P7 574 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 NPWQ8N729 165 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 AGBL5Q8NDL9 886 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 OR4D9Q8NGE8 314 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 ZNF564Q8TBZ8 553 aaPredicted RBP20.72■□□□□ 0.91
CPSF7-209ENST00000463244 PTCD2Q8WV60 388 aaKnown RBP20.72■□□□□ 0.91
CPSF7-209ENST00000463244 KCTD15Q96SI1 283 aaPredicted RBP20.72■□□□□ 0.91
CPSF7-209ENST00000463244 DDA1Q9BW61 102 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 NUP62CLQ9H1M0 184 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 SEPT3Q9UH03 358 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 B3GALT1Q9Y5Z6 326 aa20.72■□□□□ 0.91
CPSF7-209ENST00000463244 SPTAN1Q13813 2472 aaKnown RBP20.71■□□□□ 0.91
CPSF7-209ENST00000463244 USP9XQ93008 2570 aaPredicted RBP20.71■□□□□ 0.91
CPSF7-209ENST00000463244 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.71■□□□□ 0.91
CPSF7-209ENST00000463244 PPM1DO15297 605 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms