RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PTPRCAPQ14761 206 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 CNGA3Q16281 694 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 CASC4Q6P4E1 433 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 CES3Q6UWW8 571 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-202ENST00000463060 LIPIQ6XZB0 460 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 C3orf62Q6ZUJ4 267 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 GLT6D1Q7Z4J2 308 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 RAVER1Q8IY67 606 aaKnown RBP14.36□□□□□ -0.11
COL6A1-202ENST00000463060 FLCNQ8NFG4 579 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 STYXQ8WUJ0 223 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 TTC25Q96NG3 672 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 ZFYVE1Q9HBF4 777 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 DYRK4Q9NR20 520 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 NLE1Q9NVX2 485 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-202ENST00000463060 FBXL12Q9NXK8 326 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 SAMD15Q9P1V8 674 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 GGT7Q9UJ14 662 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 FZD4Q9ULV1 537 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.36□□□□□ -0.11
COL6A1-202ENST00000463060 TTC28Q96AY4 2481 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 C1orf232A0A0U1RR37 186 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 A8MX80 341 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 H0Y858 1186 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 H7C0S8 307 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 K7ESF4 209 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 BUD23O43709 281 aaKnown RBP14.35□□□□□ -0.11
COL6A1-202ENST00000463060 C1SP09871 688 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 CYP2A6P11509 494 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-202ENST00000463060 ZNF30P17039 623 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 NFKBIAP25963 317 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 ARSDP51689 593 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 FAM193AP78312 1265 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 PDE1BQ01064 536 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 SEPT6Q14141 434 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 SLC29A2Q14542 456 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 CRYMQ14894 314 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 SKIDA1Q1XH10 827 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 SPANXN3Q5MJ09 141 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 LRRC66Q68CR7 880 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 ERAP2Q6P179 960 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 TECPR1Q7Z6L1 1165 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 KBTBD6Q86V97 674 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 PALM2Q8IXS6 379 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 IQCKQ8N0W5 287 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 PAF1Q8N7H5 531 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 OR4K2Q8NGD2 314 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 OR13C4Q8NGS5 318 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 CDKN2AIPNLQ96HQ2 116 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 DNAJC1Q96KC8 554 aaKnown RBP14.35□□□□□ -0.11
COL6A1-202ENST00000463060 COQ10AQ96MF6 247 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 OMDQ99983 421 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 GPR63Q9BZJ6 419 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 MFSD1Q9H3U5 465 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 ITM2BQ9Y287 266 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 RPS6KL1Q9Y6S9 549 aa14.35□□□□□ -0.11
COL6A1-202ENST00000463060 SCN8AQ9UQD0 1980 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 PSMD11O00231 422 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 GAPDHSO14556 408 aaPredicted RBP14.34□□□□□ -0.11
COL6A1-202ENST00000463060 TSPAN6O43657 245 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 PLRG1O43660 514 aaKnown RBP14.34□□□□□ -0.11
COL6A1-202ENST00000463060 SPAG6O75602 509 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 RNASEH2AO75792 299 aaKnown RBP14.34□□□□□ -0.11
COL6A1-202ENST00000463060 ABHD2P08910 425 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 XPAP23025 273 aaPredicted RBP14.34□□□□□ -0.11
COL6A1-202ENST00000463060 HOXA6P31267 233 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 TPMTP51580 245 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 PTPN5P54829 565 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 XIAPP98170 497 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 CCDC15Q0P6D6 951 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 KIAA0930Q6ICG6 404 aaPredicted RBP14.34□□□□□ -0.11
COL6A1-202ENST00000463060 TRMT10BQ6PF06 316 aaKnown RBP14.34□□□□□ -0.11
COL6A1-202ENST00000463060 RFLNAQ6ZTI6 216 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 HSD11B1LQ7Z5J1 315 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 BMP8AQ7Z5Y6 402 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 CACUL1Q86Y37 369 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 UNC5BQ8IZJ1 945 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 CAMKK1Q8N5S9 505 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 TSTD1Q8NFU3 115 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 GSDMBQ8TAX9 411 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 HMGB4Q8WW32 186 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 CFAP36Q96G28 342 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 SGSM3Q96HU1 749 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 TBATAQ96M53 351 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 ARFGAP3Q9NP61 516 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 CD93Q9NPY3 652 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 RABGEF1Q9UJ41 708 aa14.34□□□□□ -0.11
COL6A1-202ENST00000463060 BPTFQ12830 3046 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 LRRK1Q38SD2 2015 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 TCRBV9S1A1TA0A576 114 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 CCDC78A2IDD5 438 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 RGSL1A5PLK6 1076 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 FAM159BA6NKW6 160 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 DYNC1I1O14576 645 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 STX7O15400 261 aaKnown RBP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 RPP40O75818 363 aaKnown RBP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 ACSL3O95573 720 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 APBB3O95704 486 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 BPIP17213 487 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms