RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CCNB1P14635 433 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 KELP23276 732 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 ETV3P41162 512 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 SLC1A1P43005 524 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 RPIAP49247 311 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 EPHB1P54762 984 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 SRP54P61011 504 aaKnown RBP10.18□□□□□ -0.78
SF3A3-204ENST00000462258 PPIDQ08752 370 aaKnown RBP10.18□□□□□ -0.78
SF3A3-204ENST00000462258 SLC10A2Q12908 348 aaPredicted RBP10.18□□□□□ -0.78
SF3A3-204ENST00000462258 ZBTB17Q13105 803 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 TCEAL1Q15170 157 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 LRRC38Q5VT99 294 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 LRRC66Q68CR7 880 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 KCTD16Q68DU8 428 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 RD3Q7Z3Z2 195 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 TSPAN33Q86UF1 283 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 HEATR4Q86WZ0 1026 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 GKN2Q86XP6 184 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 RFX6Q8HWS3 928 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 RHOT1Q8IXI2 618 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 NDUFAF2Q8N183 169 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 CACTIN-AS1Q8N1I8 211 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 ARL10Q8N8L6 244 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 KYQ8NBH2 561 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 CCNYQ8ND76 341 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 PIH1D2Q8WWB5 315 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 OR1E3Q8WZA6 343 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 NAT6Q93015 286 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 SCRN2Q96FV2 425 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 DEPDC7Q96QD5 511 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 RBM15Q96T37 977 aaKnown RBP eCLIP10.18□□□□□ -0.789e-10■□□□□ 10.4
SF3A3-204ENST00000462258 LGMNQ99538 433 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 KCTD5Q9NXV2 234 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 DDX56Q9NY93 547 aaKnown RBP10.18□□□□□ -0.78
SF3A3-204ENST00000462258 GOLGA6AQ9NYA3 693 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 RAXQ9Y2V3 346 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 HYOU1Q9Y4L1 999 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 HEY1Q9Y5J3 304 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 DGKBQ9Y6T7 804 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 RP1P56715 2156 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 ZFC3H1O60293 1989 aaKnown RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 ADAMTS20P59510 1910 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 ASXL3Q9C0F0 2248 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 CPED1A4D0V7 1026 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 EME2A4GXA9 379 aaPredicted RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 PPP1R12AO14974 1030 aaPredicted RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 YY2O15391 372 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 PSTPIP1O43586 416 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 TNFP01375 233 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 HOXC4P09017 264 aaPredicted RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 COMTP21964 271 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 CES1P23141 567 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 TRIM23P36406 574 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 MAGEA1P43355 309 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 ZNF75DP51815 510 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 DYNLT1P63172 113 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 IFI35P80217 286 aaPredicted RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 NIPAL4Q0D2K0 466 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 PTPRRQ15256 657 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 PERM1Q5SV97 790 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 CDCP2Q5VXM1 449 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 RAET1GQ6H3X3 334 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 PNCKQ6P2M8 343 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 CRTC1Q6UUV9 634 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 HSD11B1LQ7Z5J1 315 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 LPCAT1Q8NF37 534 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 TPCN2Q8NHX9 752 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 ARRDC2Q8TBH0 407 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 SCG3Q8WXD2 468 aaKnown RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 RNF25Q96BH1 459 aaPredicted RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 MRFAP1L1Q96HT8 127 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 OLFM3Q96PB7 478 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 SMIM14Q96QK8 99 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 LGR4Q9BXB1 951 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 MAK16Q9BXY0 300 aaKnown RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 NRSN2Q9GZP1 204 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 ABCG4Q9H172 646 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 GOLPH3Q9H4A6 298 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 LUC7LQ9NQ29 371 aaKnown RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 MRPL40Q9NQ50 206 aaKnown RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 PHPT1Q9NRX4 125 aaPredicted RBP10.17□□□□□ -0.78
SF3A3-204ENST00000462258 SIRPGQ9P1W8 387 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 MOSPD1Q9UJG1 213 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 DNPEPQ9ULA0 475 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 PPIL1Q9Y3C6 166 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 PCDHB1Q9Y5F3 818 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 AK5Q9Y6K8 562 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 KNTC1P50748 2209 aa10.17□□□□□ -0.78
SF3A3-204ENST00000462258 ZFYVE26Q68DK2 2539 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 A0A0U1RQS6 177 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 PRSS38A1L453 326 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 PDE2AO00408 941 aaPredicted RBP10.16□□□□□ -0.78
SF3A3-204ENST00000462258 TNFRSF10CO14798 259 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CSO75390 466 aaKnown RBP10.16□□□□□ -0.78
SF3A3-204ENST00000462258 LCA5LO95447 670 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 JCHAINP01591 159 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 ZFXP17010 805 aaPredicted RBP10.16□□□□□ -0.78
SF3A3-204ENST00000462258 ZNF30P17039 623 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 TGM2P21980 687 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CYLC1P35663 651 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms