RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	TCTN3	Q6NUS6	607 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	BRAT1	Q6PJG6	821 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	NRSN1	Q8IZ57	195 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	BMPER	Q8N8U9	685 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	STARD8	Q92502	1023 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	C18orf8	Q96DM3	657 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	RTP4	Q96DX8	246 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	CRACR2A	Q9BSW2	395 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	SUV39H2	Q9H5I1	410 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	WDR26	Q9H7D7	661 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	PRDM8	Q9NQV8	689 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	OCIAD1	Q9NX40	245 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	APEX2	Q9UBZ4	518 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	ATP8A1	Q9Y2Q0	1164 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	OTOG	Q6ZRI0	2925 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	LOC101059948	A0A1B0GTJ6	334 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	PRSS38	A1L453	326 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	GOLGA6L3	A6NEY3	463 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	LRRC10B	A6NIK2	292 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	LGALS16	A8MUM7	142 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	INSIG1	O15503	277 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	PIGN	O95427	931 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	ECEL1	O95672	775 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	TPM3	P06753	285 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	TCN2	P20062	427 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	CSF2RB	P32927	897 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	MAN1A1	P33908	653 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	UBASH3A	P57075	661 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	ILF3	Q12906	894 aa	Known RBP eCLIP	13.19	□□□□□ -0.3	2e-6	■■□□□ 13.2
SNHG17-208	ENST00000456953	MIIP	Q5JXC2	388 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	CFAP58	Q5T655	872 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	NKAIN2	Q5VXU1	208 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	TRNP1	Q6NT89	227 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	HEATR4	Q86WZ0	1026 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	ZNF354C	Q86Y25	554 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	XYLT1	Q86Y38	959 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	UNC5B	Q8IZJ1	945 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	TMEM35B	Q8NCS4	154 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	CFAP57	Q96MR6	1250 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	ZNF641	Q96N77	438 aa	Predicted RBP	13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	ZPBP	Q9BS86	351 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	GSDMC	Q9BYG8	508 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	TRIT1	Q9H3H1	467 aa	Known RBP	13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	PLCB1	Q9NQ66	1216 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	TAAR2	Q9P1P5	351 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	MOSPD1	Q9UJG1	213 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	NEU3	Q9UQ49	428 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	KCNMB2	Q9Y691	235 aa		13.19	□□□□□ -0.3
SNHG17-208	ENST00000456953	IGHV1OR21-1	A0A087WYE8	117 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	CBFA2T2	O43439	604 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	RECQL5	O94762	991 aa	Predicted RBP	13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	NR1D1	P20393	614 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	GNLY	P22749	145 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	MPST	P25325	297 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	CDH5	P33151	784 aa	Predicted RBP	13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	ADRA1B	P35368	520 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	UBXN1	Q04323	297 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	PEX6	Q13608	980 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	RAPGEF1	Q13905	1077 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	TMEM71	Q6P5X7	295 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	ASB18	Q6ZVZ8	466 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	ARC	Q7LC44	396 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	KDELC2	Q7Z4H8	507 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	SLC47A2	Q86VL8	602 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	DNAAF5	Q86Y56	855 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	NRROS	Q86YC3	692 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	CCDC13	Q8IYE1	715 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	EFCAB3	Q8N7B9	438 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	TBC1D31	Q96DN5	1066 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	LGR4	Q9BXB1	951 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	CARS2	Q9HA77	564 aa	Known RBP	13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	IFNK	Q9P0W0	207 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	PDP2	Q9P2J9	529 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	LHX3	Q9UBR4	397 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	TMEM59L	Q9UK28	342 aa		13.18	□□□□□ -0.3
SNHG17-208	ENST00000456953	C2CD3	Q4AC94	2353 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	POLQ	O75417	2590 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	FAM72C	H0Y354	149 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953		K7EM74	188 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	LRIG2	O94898	1065 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	PRKCG	P05129	697 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	ELFN1	P0C7U0	828 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	SLC9A1	P19634	815 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	CLCN1	P35523	988 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	GPLD1	P80108	840 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	ATP11A	P98196	1134 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	MC2R	Q01718	297 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	APBA1	Q02410	837 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	EXOC3L4	Q17RC7	722 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	ATP1A1-AS1	Q5TC04	95 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	FAM72A	Q5TYM5	149 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	FAM72D	Q6L9T8	149 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	C16orf46	Q6P387	395 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	CEACAM20	Q6UY09	585 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	GBP6	Q6ZN66	633 aa		13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	APTX	Q7Z2E3	356 aa	Known RBP	13.17	□□□□□ -0.3
SNHG17-208	ENST00000456953	TIPARP	Q7Z3E1	657 aa	Known RBP	13.17	□□□□□ -0.3

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