RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TCEA3O75764 348 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 MYCLP1P12525 358 aaPredicted RBP17.88■□□□□ 0.45
MSH6-207ENST00000456246 ZNF30P17039 623 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 EPHB1P54762 984 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 RHOT1Q8IXI2 618 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 RAVER1Q8IY67 606 aaKnown RBP17.88■□□□□ 0.45
MSH6-207ENST00000456246 CCDC13Q8IYE1 715 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 CBARPQ8N350 705 aaPredicted RBP17.88■□□□□ 0.45
MSH6-207ENST00000456246 CCNYQ8ND76 341 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 OR6C4Q8NGE1 309 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 PIH1D2Q8WWB5 315 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 RAPGEF5Q92565 580 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 PDXPQ96GD0 296 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 MAK16Q9BXY0 300 aaKnown RBP17.88■□□□□ 0.45
MSH6-207ENST00000456246 LUC7LQ9NQ29 371 aaKnown RBP17.88■□□□□ 0.45
MSH6-207ENST00000456246 DDX56Q9NY93 547 aaKnown RBP17.88■□□□□ 0.45
MSH6-207ENST00000456246 GPSM3Q9Y4H4 160 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 TTLL3Q9Y4R7 772 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 ASXL3Q9C0F0 2248 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 DSPP15924 2871 aaKnown RBP17.87■□□□□ 0.45
MSH6-207ENST00000456246 NPIPB15A6NHN6 443 aaPredicted RBP17.87■□□□□ 0.45
MSH6-207ENST00000456246 MAP3K6O95382 1288 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 PYGLP06737 847 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 MYF5P13349 255 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 LHCGRP22888 699 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 HADHBP55084 474 aaKnown RBP17.87■□□□□ 0.45
MSH6-207ENST00000456246 DPTQ07507 201 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 PPIDQ08752 370 aaKnown RBP17.87■□□□□ 0.45
MSH6-207ENST00000456246 SLC9A4Q6AI14 798 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 RD3Q7Z3Z2 195 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 TDRD1Q9BXT4 1180 aaKnown RBP17.87■□□□□ 0.45
MSH6-207ENST00000456246 BRD8Q9H0E9 1235 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 FGF22Q9HCT0 170 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 PADI4Q9UM07 663 aa17.87■□□□□ 0.45
MSH6-207ENST00000456246 ZFYVE26Q68DK2 2539 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 A0A087WV48 116 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 A0A0J9YYE9 177 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 TMEM202A6NGA9 273 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 APOL1O14791 398 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 PPP1R12AO14974 1030 aaPredicted RBP17.86■□□□□ 0.45
MSH6-207ENST00000456246 TRBC1P01850 177 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 KRT1P04264 644 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 IFI35P80217 286 aaPredicted RBP17.86■□□□□ 0.45
MSH6-207ENST00000456246 DSC2Q02487 901 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 PDK1Q15118 436 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 DENND2CQ68D51 928 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 RBM44Q6ZP01 1051 aaKnown RBP17.86■□□□□ 0.45
MSH6-207ENST00000456246 CCDC170Q8IYT3 715 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 LSMEM2Q8N112 164 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 PLD5Q8N7P1 536 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 OR1E3Q8WZA6 343 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 TEX101Q9BY14 249 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 GPR34Q9UPC5 381 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 LHX6Q9UPM6 363 aa17.86■□□□□ 0.45
MSH6-207ENST00000456246 PRSS38A1L453 326 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 CAPN8A6NHC0 703 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 C3orf70A6NLC5 250 aaPredicted RBP17.85■□□□□ 0.45
MSH6-207ENST00000456246 SPOPO43791 374 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 CSO75390 466 aaKnown RBP17.85■□□□□ 0.45
MSH6-207ENST00000456246 HLA-DQB2P05538 268 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 CELA2BP08218 269 aaPredicted RBP17.85■□□□□ 0.45
MSH6-207ENST00000456246 PDHA1P08559 390 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 ACTN2P35609 894 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 ETV3P41162 512 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 SLC10A2Q12908 348 aaPredicted RBP17.85■□□□□ 0.45
MSH6-207ENST00000456246 PEX6Q13608 980 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 RAET1GQ6H3X3 334 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 BZW1Q7L1Q6 419 aaKnown RBP17.85■□□□□ 0.45
MSH6-207ENST00000456246 ZNF765Q7L2R6 523 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 HSD11B1LQ7Z5J1 315 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 NLRP8Q86W28 1048 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 HEATR4Q86WZ0 1026 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 TC2NQ8N9U0 490 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 SNIP1Q8TAD8 396 aaKnown RBP17.85■□□□□ 0.45
MSH6-207ENST00000456246 ARRDC2Q8TBH0 407 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 LYSMD1Q96S90 227 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 PCDH9Q9HC56 1237 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 GULP1Q9UBP9 304 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 HEY1Q9Y5J3 304 aa17.85■□□□□ 0.45
MSH6-207ENST00000456246 RP1P56715 2156 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 ZFHX4Q86UP3 3567 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 PSTPIP1O43586 416 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 LCA5LO95447 670 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 CTPS1P17812 591 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 TGM2P21980 687 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 CYLC1P35663 651 aaPredicted RBP17.84■□□□□ 0.45
MSH6-207ENST00000456246 MAGEA1P43355 309 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 CDK3Q00526 305 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 SPA17Q15506 151 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 ISXQ2M1V0 245 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 LRRC66Q68CR7 880 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 CRTC1Q6UUV9 634 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 Q6ZVL8 140 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 TECPR1Q7Z6L1 1165 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 TAF8Q7Z7C8 310 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 TSPAN33Q86UF1 283 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 NRSN1Q8IZ57 195 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 KYQ8NBH2 561 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 KIAA1524Q8TCG1 905 aa17.84■□□□□ 0.45
MSH6-207ENST00000456246 LGMNQ99538 433 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms