RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PRKD1Q15139 912 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 AFTPHQ6ULP2 937 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP45Q70EL2 814 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 ABRAQ8N0Z2 381 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SDR42E1Q8WUS8 393 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 AP1S3Q96PC3 154 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SH2D3AQ9BRG2 576 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 B3GNT3Q9Y2A9 372 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 DERAQ9Y315 318 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 RGPD8O14715 1765 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 DIP2CQ9Y2E4 1556 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 E7ENX8 843 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 MRASO14807 208 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 TSPAN1O60635 241 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 TNFRSF21O75509 655 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 ARL6IP5O75915 188 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SEC24DO94855 1032 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 KELP23276 732 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 RBL1P28749 1068 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 CRHR1P34998 444 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 UGT2B10P36537 528 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SCNN1AP37088 669 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SSTP61278 116 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 EMC2Q15006 297 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SLC22A10Q63ZE4 541 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 BBS12Q6ZW61 710 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 RBM15BQ8NDT2 890 aaKnown RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 GIPC3Q8TF64 312 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 CRAMP1Q96RY5 1269 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 NPAS2Q99743 824 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 POTEKPQ9BYX7 375 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SH3BP1Q9Y3L3 701 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 UGT2B17O75795 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 GSTM1P09488 218 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 PRPS2P11908 318 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 GSTM4Q03013 218 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 TDRD10Q5VZ19 366 aaKnown RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF772Q68DY9 489 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 P2RY8Q86VZ1 359 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF548Q8NEK5 533 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 OR14K1Q8NGZ2 314 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 TBC1D10AQ9BXI6 508 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 DNAJC11Q9NVH1 559 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 C5orf60A6NFR6 353 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 PLOD2O00469 737 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 ZBTB14O43829 449 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 PRKD3O94806 890 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SUPT20HL2P0C7V6 817 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 AGKQ53H12 422 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 MARC1Q5VT66 337 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 UNQ6126/PRO20091Q6UXV3 157 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 AGMOQ6ZNB7 445 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 FAM83AQ86UY5 434 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 TMEM184CQ9NVA4 438 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 MTMR4Q9NYA4 1195 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 DGKBQ9Y6T7 804 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 BTBD19C9JJ37 291 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SCAF4O95104 1147 aaKnown RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 CYB5AP00167 134 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 TBX2Q13207 712 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF177Q13360 481 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 TRMT1LQ7Z2T5 733 aaKnown RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SPARTQ8N0X7 666 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 MARK4Q96L34 752 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 VPS35Q96QK1 796 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 LMAN2LQ9H0V9 348 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 UNC93B1Q9H1C4 597 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 KAT8Q9H7Z6 458 aaKnown RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SLAIN2Q9P270 581 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 RGS17Q9UGC6 210 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 MAB21L2Q9Y586 359 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 KANTRA0A1W2PQU2 76 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 ILVBLA1L0T0 632 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SIGLEC16A6NMB1 481 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L15C9J2P7 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L13C9JLJ4 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L11C9JVI0 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L18D6R9N7 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L22D6RA61 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L17D6RBQ6 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L19D6RCP7 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L20D6RJB6 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 GPR182O15218 404 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 PAPSS1O43252 624 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SLC22A3O75751 556 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 MTA2O94776 668 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 PON1P27169 355 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 SULT1E1P49888 294 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L24Q0WX57 530 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 DNM1P34Q6PK57 102 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 RANBP3LQ86VV4 465 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 KCNN1Q92952 543 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 MTG1Q9BT17 334 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-204ENST00000455883 MYPNQ86TC9 1320 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 NID2Q14112 1375 aa5.22□□□□□ -1.57
CSMD3-204ENST00000455883 PDCD11Q14690 1871 aaKnown RBP5.21□□□□□ -1.57
CSMD3-204ENST00000455883 RIIAD1A6NNX1 92 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 FPGTO14772 594 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 LRRTM2O43300 516 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms