RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TRMT10CQ7L0Y3 403 aaKnown RBP11.26□□□□□ -0.61
TRAF4-206ENST00000454852 ZNF765Q7L2R6 523 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 LYSMD3Q7Z3D4 306 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 GLT6D1Q7Z4J2 308 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 TECPR1Q7Z6L1 1165 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 IGDCC3Q8IVU1 814 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 ZBED8Q8IZ13 594 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 PAF1Q8N7H5 531 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 TMEM105Q8N8V8 129 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 BLOC1S5Q8TDH9 187 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 PYROXD1Q8WU10 500 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 SCG3Q8WXD2 468 aaKnown RBP11.26□□□□□ -0.61
TRAF4-206ENST00000454852 NELL1Q92832 810 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 PBXIP1Q96AQ6 731 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 TTC25Q96NG3 672 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 SMIM14Q96QK8 99 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 HHIPQ96QV1 700 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 PCED1AQ9H1Q7 454 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 SLC6A17Q9H1V8 727 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 PLAC1Q9HBJ0 212 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 SAYSD1Q9NPB0 183 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 RAD18Q9NS91 495 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 NLE1Q9NVX2 485 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-206ENST00000454852 PIH1D1Q9NWS0 290 aaKnown RBP11.26□□□□□ -0.61
TRAF4-206ENST00000454852 SAMD15Q9P1V8 674 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 FBXO4Q9UKT5 387 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 FAM169AQ9Y6X4 670 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 C1orf232A0A0U1RR37 186 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 ZCWPW2A0A1B0GU75 182 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 ERLIN1O75477 346 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 CLDN7O95471 211 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 POLBP06746 335 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 ABHD2P08910 425 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 C1SP09871 688 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 PIRTP0C851 137 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 H2AFXP16104 143 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-206ENST00000454852 GM2AP17900 193 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 HADHAP40939 763 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 FAM193AP78312 1265 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 ARHGEF7Q14155 803 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 PTPRRQ15256 657 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 ANKRD20A4Q4UJ75 823 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 TMEM259Q4ZIN3 620 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 KIAA0930Q6ICG6 404 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-206ENST00000454852 TSPAN33Q86UF1 283 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 TRIM69Q86WT6 500 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 C1orf210Q8IVY1 113 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 GSPT2Q8IYD1 628 aaKnown RBP11.25□□□□□ -0.61
TRAF4-206ENST00000454852 NRSN1Q8IZ57 195 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 MAML2Q8IZL2 1156 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-206ENST00000454852 FBXO36Q8NEA4 188 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 OR13J1Q8NGT2 312 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 OR2T34Q8NGX1 318 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 COQ10AQ96MF6 247 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 PLEKHG4BQ96PX9 1271 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 GPR63Q9BZJ6 419 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 BTBD1Q9H0C5 482 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 CDC42EP4Q9H3Q1 356 aaKnown RBP11.25□□□□□ -0.61
TRAF4-206ENST00000454852 CHRAC1Q9NRG0 131 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 WSB2Q9NYS7 404 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-206ENST00000454852 MOCS1Q9NZB8 636 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 BCCIPQ9P287 314 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAF4-206ENST00000454852 ZC3H7BQ9UGR2 993 aaKnown RBP11.25□□□□□ -0.61
TRAF4-206ENST00000454852 ARL5AQ9Y689 179 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 RPS6KL1Q9Y6S9 549 aa11.25□□□□□ -0.61
TRAF4-206ENST00000454852 LRRC72A6NJI9 287 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 AGAP14A8MT82 685 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 PLK4O00444 970 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 STX7O15400 261 aaKnown RBP11.24□□□□□ -0.61
TRAF4-206ENST00000454852 LATO43561 262 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 BANF1O75531 89 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 RPP40O75818 363 aaKnown RBP11.24□□□□□ -0.61
TRAF4-206ENST00000454852 C1QAP02745 245 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 ELFN1P0C7U0 828 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 NMBRP28336 390 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 CD6P30203 668 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 NUDT1P36639 197 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 ARCN1P48444 511 aaKnown RBP11.24□□□□□ -0.61
TRAF4-206ENST00000454852 SPINT3P49223 89 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 LIG3P49916 1009 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 CCR5P51681 352 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 PMS2P54278 862 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 RPS21P63220 83 aaKnown RBP11.24□□□□□ -0.61
TRAF4-206ENST00000454852 CRADDP78560 199 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 DPTQ07507 201 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 MTM1Q13496 603 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 CRYMQ14894 314 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 ZNF528Q3MIS6 628 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 LRRC73Q5JTD7 316 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 UNC5AQ6ZN44 842 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 WDR5BQ86VZ2 330 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 CCDC25Q86WR0 208 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 HORMAD1Q86X24 394 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 LMNTD2Q8IXW0 634 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 DTWD2Q8NBA8 298 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 GSDMBQ8TAX9 411 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 MFSD3Q96ES6 412 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 DTD2Q96FN9 168 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 CDKN2AIPNLQ96HQ2 116 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms