RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PTPRNQ16849 979 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 FAM45BPQ6NSW5 357 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 CMTM8Q8IZV2 173 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 FAM45AQ8TCE6 357 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 BADQ92934 168 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 MIPEPQ99797 713 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 OSBPL1AQ9BXW6 950 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 TLE6Q9H808 572 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 POLR3BQ9NW08 1133 aaPredicted RBP13.68□□□□□ -0.22
CLK3-203ENST00000454830 WBP1LQ9NX94 342 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 TBC1D30Q9Y2I9 924 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 RAP2CQ9Y3L5 183 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 PKP3Q9Y446 797 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 SLC30A1Q9Y6M5 507 aa13.68□□□□□ -0.22
CLK3-203ENST00000454830 LAMA3Q16787 3333 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 ANKRD66B4E2M5 251 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 E5RI56 91 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 ZBTB14O43829 449 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 RBP1P09455 135 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 CDKN1CP49918 316 aaPredicted RBP13.67□□□□□ -0.22
CLK3-203ENST00000454830 SEMA3AQ14563 771 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 RFTN1Q14699 578 aaPredicted RBP13.67□□□□□ -0.22
CLK3-203ENST00000454830 CFAP61Q8NHU2 1237 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 FBXO27Q8NI29 283 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 MAPK15Q8TD08 544 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 STMN2Q93045 179 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 IL21Q9HBE4 155 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 ZDHHC2Q9UIJ5 367 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 GSC2O15499 205 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 CIB2O75838 187 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 CUL3Q13618 768 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 ARMC12Q5T9G4 340 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 C6orf163Q5TEZ5 329 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 MAVSQ7Z434 540 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 RBM15BQ8NDT2 890 aaKnown RBP13.67□□□□□ -0.22
CLK3-203ENST00000454830 MDGA1Q8NFP4 955 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 NSMCE3Q96MG7 304 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 OR52B2Q96RD2 323 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 EMILIN2Q9BXX0 1053 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.67□□□□□ -0.22
CLK3-203ENST00000454830 HIDE1A8MVS5 230 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 PFDN6O15212 129 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 GPR39O43194 453 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 SMAD6O43541 496 aaKnown RBP13.67□□□□□ -0.22
CLK3-203ENST00000454830 CDH13P55290 713 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 SLC25A3Q00325 362 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 FAM43BQ6ZT52 329 aaPredicted RBP13.67□□□□□ -0.22
CLK3-203ENST00000454830 SH3RF2Q8TEC5 729 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 CCDC124Q96CT7 223 aaKnown RBP13.67□□□□□ -0.22
CLK3-203ENST00000454830 PTCD3Q96EY7 689 aaKnown RBP13.67□□□□□ -0.22
CLK3-203ENST00000454830 CLPTM1LQ96KA5 538 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 CATSPER2Q96P56 530 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 DRC3Q9H069 523 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 IL23AQ9NPF7 189 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 HSFX1Q9UBD0 423 aa13.67□□□□□ -0.22
CLK3-203ENST00000454830 HDAC3O15379 428 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 SMIM24O75264 130 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 POLD2P49005 469 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 ERVFC1P60507 584 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 KRT72Q14CN4 511 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 C5orf22Q49AR2 442 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 AFTPHQ6ULP2 937 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 SIKE1Q9BRV8 207 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 CLEC4EQ9ULY5 219 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 CDYLQ9Y232 598 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 SSX2IPQ9Y2D8 614 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 ARIH1Q9Y4X5 557 aaPredicted RBP13.66□□□□□ -0.22
CLK3-203ENST00000454830 SUPT3HB4E1H0 165 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 SUPT3HO75486 399 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 SBK3P0C264 359 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 ITGB6P18564 788 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 KCNA5P22460 613 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 BCL2L1Q07817 233 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 ZBP1Q9H171 429 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 INSL6Q9Y581 213 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 EFEMP2O95967 443 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 TAF1AQ15573 450 aaPredicted RBP13.66□□□□□ -0.22
CLK3-203ENST00000454830 C1orf53Q5VUE5 145 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 RBM23Q86U06 439 aaKnown RBP13.66□□□□□ -0.22
CLK3-203ENST00000454830 PHTF2Q8N3S3 785 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 AFAP1L2Q8N4X5 818 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 DTX3LQ8TDB6 740 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 ZFRQ96KR1 1074 aaKnown RBP13.66□□□□□ -0.22
CLK3-203ENST00000454830 MCMBPQ9BTE3 642 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 DENND2DQ9H6A0 471 aaPredicted RBP13.66□□□□□ -0.22
CLK3-203ENST00000454830 IGSF5Q9NSI5 407 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 ABCB8Q9NUT2 735 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 UTP6Q9NYH9 597 aaKnown RBP13.66□□□□□ -0.22
CLK3-203ENST00000454830 TAS2R13Q9NYV9 303 aa13.66□□□□□ -0.22
CLK3-203ENST00000454830 CRCPO75575 148 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 CDC25CP30307 473 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 LBX1P52954 281 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 COPAP53621 1224 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 CREMQ03060 361 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 PFKFB4Q16877 469 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 RAB44Q7Z6P3 723 aaPredicted RBP13.65□□□□□ -0.22
CLK3-203ENST00000454830 HIPK4Q8NE63 616 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 DNAJC28Q9NX36 388 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 LNPEPQ9UIQ6 1025 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 ASB3Q9Y575 518 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms