RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SPAG4Q9NPE6 437 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 MARCH2Q9P0N8 246 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 NUDT5Q9UKK9 219 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 TMCO1Q9UM00 188 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 G3BP2Q9UN86 482 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 COMMD3-BMI1R4GMX3 469 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 E7ENX8 843 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 MRASO14807 208 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 CD3EAPO15446 510 aaKnown RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 GPC4O75487 556 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 NDST3O95803 873 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 MTHFD2P13995 350 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 ZNF37AP17032 561 aaPredicted RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 CES1P23141 567 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 CALRP27797 417 aaKnown RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 SLC7A1P30825 629 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 PEX19P40855 299 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 KCNC1P48547 511 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 STC1P52823 247 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 MAXP61244 160 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 CACNB2Q08289 660 aaPredicted RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 CRHR2Q13324 411 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 ADRM1Q16186 407 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 LRRC36Q1X8D7 754 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 C11orf91Q3C1V1 193 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 AGKQ53H12 422 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 VARS2Q5ST30 1063 aaKnown RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 GPR158Q5T848 1215 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 KANK2Q63ZY3 851 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 OGFOD2Q6N063 350 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 PTAR1Q7Z6K3 402 aaPredicted RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 TFAP2DQ7Z6R9 452 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 PHYKPLQ8IUZ5 450 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 LINC01599Q8WXQ3 324 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 PTERQ96BW5 349 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 PPP1R36Q96LQ0 422 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 KLHL5Q96PQ7 755 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 PKP2Q99959 881 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 SH3GL3Q99963 347 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 MGME1Q9BQP7 344 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 DERL2Q9GZP9 239 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 MAGEH1Q9H213 219 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 NLE1Q9NVX2 485 aaPredicted RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.52□□□□□ -0.43e-6■■■■□ 21.3
ECHDC1-209ENST00000454591 ABCD2Q9UBJ2 740 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 CROTQ9UKG9 612 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 NDUFAF1Q9Y375 327 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 MTF2Q9Y483 593 aaPredicted RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 ARIH1Q9Y4X5 557 aaPredicted RBP12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 AP4B1Q9Y6B7 739 aa12.52□□□□□ -0.4
ECHDC1-209ENST00000454591 CFLARO15519 480 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 CA12O43570 354 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 KLK8O60259 260 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 SRP72O76094 671 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 CDK14O94921 469 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 TNFAIP8O95379 198 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 GOT2P00505 430 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 ZNF26P17031 533 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 FGFR3P22607 806 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 GRIA2P42262 883 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 RPL5P46777 297 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 TM4SF4P48230 202 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 ATP6V0D1P61421 351 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 TXNL4AP83876 142 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 FOXM1Q08050 763 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 ITKQ08881 620 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 SREBF2Q12772 1141 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 EFEMP1Q12805 493 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 GPR17Q13304 367 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 APOFQ13790 326 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 DDR2Q16832 855 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 CNPY1Q3B7I2 92 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 RAP1GAP2Q684P5 730 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 NAIF1Q69YI7 327 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 BORAQ6PGQ7 559 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 RAB44Q7Z6P3 723 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 MINDY1Q8N5J2 469 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 PCYOX1LQ8NBM8 494 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 OR6P1Q8NGX9 317 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 USP13Q92995 863 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 FBXO32Q969P5 355 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 KIAA1191Q96A73 305 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 PABPC5Q96DU9 382 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 C19orf60Q96EN9 201 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 MARK4Q96L34 752 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 ZNF597Q96LX8 424 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 TBATAQ96M53 351 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 GCNAQ96QF7 691 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 SEMA3CQ99985 751 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 HOPXQ9BPY8 73 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 NUSAP1Q9BXS6 441 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 MRPS26Q9BYN8 205 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 ALG9Q9H6U8 611 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms