RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 RHOT1Q8IXI2 618 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 ARL10Q8N8L6 244 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 WDR48Q8TAF3 677 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 PIH1D2Q8WWB5 315 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 DTD2Q96FN9 168 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 PDXPQ96GD0 296 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 MCCC1Q96RQ3 725 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-203ENST00000454233 LUC7LQ9NQ29 371 aaKnown RBP10.69□□□□□ -0.7
DDX39A-203ENST00000454233 GOLGA6AQ9NYA3 693 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 SIRPGQ9P1W8 387 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 DNPEPQ9ULA0 475 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 PADI4Q9UM07 663 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 GPR34Q9UPC5 381 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 PPIL1Q9Y3C6 166 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 HEY1Q9Y5J3 304 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 APC2O95996 2303 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 MYLKQ15746 1914 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 PPP1R12AO14974 1030 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 FZD6O60353 706 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 CSO75390 466 aaKnown RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 JCHAINP01591 159 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 HLA-DQB2P05538 268 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 PDHA1P08559 390 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 MYCLP1P12525 358 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 ZNF30P17039 623 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 LHCGRP22888 699 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 CYLC1P35663 651 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 ETV3P41162 512 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 MAGEA1P43355 309 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 RPL26P61254 145 aaKnown RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 PPIDQ08752 370 aaKnown RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 AP1B1Q10567 949 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 PDK1Q15118 436 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 TCEAL1Q15170 157 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 SPA17Q15506 151 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 SLC9A4Q6AI14 798 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 RAET1GQ6H3X3 334 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 Q6ZVL8 140 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 HSD11B1LQ7Z5J1 315 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 TAF8Q7Z7C8 310 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 TSPAN33Q86UF1 283 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 HEATR4Q86WZ0 1026 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 RFX6Q8HWS3 928 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 PLD5Q8N7P1 536 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 TC2NQ8N9U0 490 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 OR6C4Q8NGE1 309 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 ARRDC2Q8TBH0 407 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 LRRN4Q8WUT4 740 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 OR1E3Q8WZA6 343 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 RNF25Q96BH1 459 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 RBM15Q96T37 977 aaKnown RBP eCLIP10.68□□□□□ -0.74e-8■■■■■ 32.2
DDX39A-203ENST00000454233 LGMNQ99538 433 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 TDRD1Q9BXT4 1180 aaKnown RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 CYP4F12Q9HCS2 524 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 FGF22Q9HCT0 170 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 RPL26L1Q9UNX3 145 aaKnown RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 LHX6Q9UPM6 363 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 CHKBQ9Y259 395 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 GPSM3Q9Y4H4 160 aa10.68□□□□□ -0.7
DDX39A-203ENST00000454233 URB1O60287 2271 aaKnown RBP10.68□□□□□ -0.7
DDX39A-203ENST00000454233 ANKRD11Q6UB99 2663 aaPredicted RBP10.67□□□□□ -0.7
DDX39A-203ENST00000454233 A0A0J9YYE9 177 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 PRSS38A1L453 326 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 CAPN8A6NHC0 703 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 C3orf70A6NLC5 250 aaPredicted RBP10.67□□□□□ -0.7
DDX39A-203ENST00000454233 KCNK1O00180 336 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 USP12O75317 370 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 TCEA3O75764 348 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 TRBC1P01850 177 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 PYGLP06737 847 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 COMTP21964 271 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 TGM2P21980 687 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 TEAD1P28347 426 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 ACTN2P35609 894 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 GPR1P46091 355 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 IFI35P80217 286 aaPredicted RBP10.67□□□□□ -0.7
DDX39A-203ENST00000454233 NIPAL4Q0D2K0 466 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 TFDP2Q14188 446 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 PERM1Q5SV97 790 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 LRRC66Q68CR7 880 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 C19orf48Q6RUI8 117 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 CRTC1Q6UUV9 634 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 RBM44Q6ZP01 1051 aaKnown RBP10.67□□□□□ -0.7
DDX39A-203ENST00000454233 BZW1Q7L1Q6 419 aaKnown RBP10.67□□□□□ -0.7
DDX39A-203ENST00000454233 CCDC170Q8IYT3 715 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 PELI3Q8N2H9 469 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 CBARPQ8N350 705 aaPredicted RBP10.67□□□□□ -0.7
DDX39A-203ENST00000454233 KYQ8NBH2 561 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 FAM46DQ8NEK8 389 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 LPCAT1Q8NF37 534 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 GRAMD1AQ96CP6 724 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 AP2M1Q96CW1 435 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 DCBLD2Q96PD2 775 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 CCDC3Q9BQI4 270 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 LGR4Q9BXB1 951 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 TEX101Q9BY14 249 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 BRD8Q9H0E9 1235 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 SYNDIG1Q9H7V2 258 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 CARS2Q9HA77 564 aaKnown RBP10.67□□□□□ -0.7
DDX39A-203ENST00000454233 PCDH9Q9HC56 1237 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms