RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 ITGADQ13349 1161 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 RASA2Q15283 850 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 LRRC8EQ6NSJ5 796 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 SFTPA2Q8IWL1 248 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 ZCCHC9Q8N567 271 aaKnown RBP4.82□□□□□ -1.64
USP25-206ENST00000453553 PARP16Q8N5Y8 322 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 FRMD1Q8N878 549 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 MIGA1Q8NAN2 632 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 CADM4Q8NFZ8 388 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 SCFD2Q8WU76 684 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 BBS4Q96RK4 519 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 CYSLTR2Q9NS75 346 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 TMEM51Q9NW97 253 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 PCDHA7Q9UN72 937 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 ZNF711Q9Y462 761 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 NFE2L3Q9Y4A8 694 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 LSM4Q9Y4Z0 139 aaKnown RBP4.82□□□□□ -1.64
USP25-206ENST00000453553 KCNE2Q9Y6J6 123 aa4.82□□□□□ -1.64
USP25-206ENST00000453553 FAM170AA1A519 330 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 TTC36A6NLP5 189 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 LRRC53A6NM62 1247 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 H7C0S8 307 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 IFNL4K9M1U5 179 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 SEC14L2O76054 403 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 SEC31AO94979 1220 aaKnown RBP4.81□□□□□ -1.64
USP25-206ENST00000453553 NTN1O95631 604 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 ETFAP13804 333 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 ITGAXP20702 1163 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 PSMB10P40306 273 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 PBX3P40426 434 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 RPL7AP62424 266 aaKnown RBP4.81□□□□□ -1.64
USP25-206ENST00000453553 EPS8Q12929 822 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 CTTNQ14247 550 aaKnown RBP4.81□□□□□ -1.64
USP25-206ENST00000453553 RPUSD3Q6P087 351 aaKnown RBP4.81□□□□□ -1.64
USP25-206ENST00000453553 CDC73Q6P1J9 531 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 NOXA1Q86UR1 476 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 TDRPQ86YL5 185 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 TRIB2Q92519 343 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 CNDP2Q96KP4 475 aaKnown RBP4.81□□□□□ -1.64
USP25-206ENST00000453553 SIL1Q9H173 461 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 EBF3Q9H4W6 596 aa4.81□□□□□ -1.64
USP25-206ENST00000453553 MRPL44Q9H9J2 332 aaKnown RBP4.81□□□□□ -1.64
USP25-206ENST00000453553 PASKQ96RG2 1323 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 IGHV4-28A0A0C4DH34 117 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 USP17L23D6RBM5 183 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 SEC14L5O43304 696 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 ALPLP05186 524 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 MMP2P08253 660 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 NR2F1P10589 423 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 RARGP13631 454 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 AGAP20933 346 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 GCH1P30793 250 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 SHMT1P34896 483 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 EIF2DP41214 584 aaKnown RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 GARSP41250 739 aaKnown RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 DSC1Q08554 894 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 TMEM115Q12893 351 aaPredicted RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 TMEM266Q2M3C6 531 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 TCTN1Q2MV58 587 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 TDRD12Q587J7 1177 aaKnown RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 SGO1Q5FBB7 561 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 GPR139Q6DWJ6 353 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 NAA16Q6N069 864 aaPredicted RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 TTI2Q6NXR4 508 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 CYP20A1Q6UW02 462 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 PRPF39Q86UA1 669 aaKnown RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 VSIG1Q86XK7 387 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 TEX11Q8IYF3 940 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 B4GALNT2Q8NHY0 566 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 ARRDC2Q8TBH0 407 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 FBXL8Q96CD0 374 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 ZNF570Q96NI8 536 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 NTPCRQ9BSD7 190 aaKnown RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 MAK16Q9BXY0 300 aaKnown RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 MAGEE1Q9HCI5 957 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 OR6C3Q9NZP0 311 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 ZHX1Q9UKY1 873 aaPredicted RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 INTS6Q9UL03 887 aaKnown RBP4.8□□□□□ -1.64
USP25-206ENST00000453553 MYO6Q9UM54 1294 aa4.8□□□□□ -1.64
USP25-206ENST00000453553 UTYO14607 1347 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 A0A1W2PQ09 198 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 KRTAP29-1A8MX34 341 aaPredicted RBP4.79□□□□□ -1.64
USP25-206ENST00000453553 BCAT2O15382 392 aaPredicted RBP4.79□□□□□ -1.64
USP25-206ENST00000453553 INSIG1O15503 277 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 HNRNPCL1O60812 293 aaKnown RBP4.79□□□□□ -1.64
USP25-206ENST00000453553 NDUFB4O95168 129 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 VNN2O95498 520 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 HSPA4LO95757 839 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 GLUD1P00367 558 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 HOXB5P09067 269 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 CHATP28329 748 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 HOXA11P31270 313 aaPredicted RBP4.79□□□□□ -1.64
USP25-206ENST00000453553 AMTP48728 403 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 GLUD2P49448 558 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 FOXG1P55316 489 aaPredicted RBP4.79□□□□□ -1.64
USP25-206ENST00000453553 PSMC6P62333 389 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 SHBQ15464 509 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 NCEH1Q6PIU2 408 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 CCDC105Q8IYK2 499 aa4.79□□□□□ -1.64
USP25-206ENST00000453553 KCTD6Q8NC69 237 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms