RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 NNMTP40261 264 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 EIF2DP41214 584 aaKnown RBP4.55□□□□□ -1.68
LINC00393-202ENST00000452852 KRTAP10-9P60411 292 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 GPC5P78333 572 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 EPS8Q12929 822 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 PSMD6Q15008 389 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 BMP2KLQ5H9B9 411 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 EPHA10Q5JZY3 1008 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 PRAMEF17Q5VTA0 474 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 CDC73Q6P1J9 531 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 CYP20A1Q6UW02 462 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 SLC39A5Q6ZMH5 540 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 FAM47EQ6ZV65 393 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 TEX11Q8IYF3 940 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 KCTD6Q8NC69 237 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 SRFBP1Q8NEF9 429 aaKnown RBP4.55□□□□□ -1.68
LINC00393-202ENST00000452852 RAB40AQ8WXH6 277 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 ATP2A3Q93084 1043 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 TEKT1Q969V4 418 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 OPTNQ96CV9 577 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 ERO1AQ96HE7 468 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 CLMNQ96JQ2 1002 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 CMTM3Q96MX0 182 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 TTC14Q96N46 770 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 BICC1Q9H694 974 aaKnown RBP4.55□□□□□ -1.68
LINC00393-202ENST00000452852 TDRD3Q9H7E2 651 aaKnown RBP4.55□□□□□ -1.68
LINC00393-202ENST00000452852 ERVK-5Q9HDB9 667 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 IL1RAPL1Q9NZN1 696 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 PEMTQ9UBM1 199 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 CHORDC1Q9UHD1 332 aaPredicted RBP4.55□□□□□ -1.68
LINC00393-202ENST00000452852 SLCO3A1Q9UIG8 710 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 SLC25A13Q9UJS0 675 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 AMFRQ9UKV5 643 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 ZHX1Q9UKY1 873 aaPredicted RBP4.55□□□□□ -1.68
LINC00393-202ENST00000452852 MKLN1Q9UL63 735 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 ZNF711Q9Y462 761 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 TRIM17Q9Y577 477 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 PCDHAC2Q9Y5I4 1007 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 SSC5DA1L4H1 1573 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 MGAMO43451 1857 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 UTYO14607 1347 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 C17orf100A8MU93 164 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 A8MV72 311 aaPredicted RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 MYO1GB0I1T2 1018 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 BTBD18B2RXH4 712 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 SH2B2O14492 632 aaPredicted RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 EXOC3O60645 756 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 TACC1O75410 805 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 SEC14L2O76054 403 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 SEC31AO94979 1220 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 EIF2S1P05198 315 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 CELA2AP08217 269 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 ALDOCP09972 364 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 VDRP11473 427 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 PKMP14618 531 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 STAT6P42226 847 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 PTPN9P43378 593 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 ABCG1P45844 678 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 MTNR1AP48039 350 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 RPS6KA3P51812 740 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 EIF3BP55884 814 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 SLC37A1P57057 533 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 LMAN2Q12907 356 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 SLC10A2Q12908 348 aaPredicted RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 SLC18A3Q16572 532 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 TMEM266Q2M3C6 531 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 RABL6Q3YEC7 729 aaPredicted RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 NAA16Q6N069 864 aaPredicted RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 TMEM81Q6P7N7 255 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 KLHL35Q6PF15 583 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 KIRREL2Q6UWL6 708 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 TRIM72Q6ZMU5 477 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 TMEM200AQ86VY9 491 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 SCML4Q8N228 414 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 ENDOVQ8N8Q3 282 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 AKAP1Q92667 903 aaKnown RBP eCLIP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 ATP6V1E2Q96A05 226 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 JAKMIP2Q96AA8 810 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 INTS12Q96CB8 462 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 EDC3Q96F86 508 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 FAM84BQ96KN1 310 aaPredicted RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 CNDP2Q96KP4 475 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 GPR78Q96P69 363 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 NPLQ9BXD5 320 aaPredicted RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 PUS3Q9BZE2 481 aaKnown RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 POLR1BQ9H9Y6 1135 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 CCDC177Q9NQR7 707 aaPredicted RBP4.54□□□□□ -1.68
LINC00393-202ENST00000452852 EHD2Q9NZN4 543 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 FLRT1Q9NZU1 646 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 MPP6Q9NZW5 540 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 HSPB7Q9UBY9 170 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 CAPN7Q9Y6W3 813 aa4.54□□□□□ -1.68
LINC00393-202ENST00000452852 ATAD5Q96QE3 1844 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 KIF16BQ96L93 1317 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 CCL15-CCL14A0A0B4J2E2 113 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 FRMD3A2A2Y4 597 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 KRTAP29-1A8MX34 341 aaPredicted RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 DSCR3O14972 297 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 CEP104O60308 925 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms